Table 3 Annotation of the 450K-probes probes included in the mortality risk predictor (MRP)
From: Refining risk prediction in pediatric acute lymphoblastic leukemia through DNA methylation profiling
CpG ID | Gene Symbol | Location | CpG Annotation |
|---|---|---|---|
cg13901752 | OPTN / CCDC3 | 10p13 | Transcrition Start Site |
cg27210565 | SEPT7P9 | 10q11.1 | Transcrition Start Site |
cg04444771 | RASSF4 / DEPP1 | 10q11.21 | Gene Body |
cg27139956 | RASSF4 | 10q11.21 | CpG Island |
cg07260003 | VSTM4 | 10q11.23 | Gene Body |
cg20534287 | ECHS1 / PAOX | 10q26.3 | Transcrition Start Site |
cg24496614 | BEST1 / FTH1 | 11q12.3 | Transcrition Start Site |
cg03033176 | EHBP1L1 | 11q13.1 | S_Shore |
cg16110032 | Intergenic | 11q13.5 | N_Shelf |
cg14199423 | CHD4 / LPAR5 | 12p13.31 | Unclassified |
cg14541870 | SETD1B | 12q24.31 | S_Shore |
cg23743428 | MIPEPP3 | 13q12.11 | CpG Island |
cg01911068 | PCDH9 | 13q21.32 | Transcrition Start Site |
cg01363662 | ODF3L1 | 15q24.2 | Transcrition Start Site |
cg09363128 | GSE1 | 16q24.1 | Unclassified (cell-tye specific) |
cg08374494 | ZFPM1 | 16q24.2 | N_Shelf |
cg23430664 | XYLT2 | 17q21.33 | CpG Island |
cg12296532 | ACTG1 | 17q25.3 | CpG Island |
cg00671759 | ACTG1 | 17q25.3 | CpG Island |
cg04384209 | KDM4B | 19p13.3 | N_Shelf |
cg19726840 | DAZAP1 / RPS15 | 19p13.3 | Transcrition Start Site |
cg19599529 | GMFG | 19q13.2 | 3'UTR |
cg26587014 | BCL3 | 19q13.32 | S_Shelf |
cg15679331 | PRTM1 / BCL2L12 | 19q13.33 | Transcrition Start Site |
cg19675684 | AKIRIN1 | 1p34.3 | Transcrition Start Site |
cg08262220 | PRDM16 | 1p36.32 | N_Shore |
cg11096441 | ADNP / DPM1 | 20q13.13 | Transcrition Start Site |
cg06454380 | c22orf34 | 22q13.3 | S_Shelf |
cg14911521 | VAX2 / LINC01143 | 2p13.3 | N_Shore |
cg10633958 | SLC8A1 | 2p22.1 | N_Shore |
cg00866476 | MAL / MRPS5 | 2q11.1 | N_Shore |
cg00992239 | MME | 3q25.2 | Transcrition Start Site |
cg27177997 | RBPJ | 4p15.2 | S_Shore |
cg24877510 | CNOT6L | 4q21.1 | S_Shore |
cg02763617 | CWC27 | 5q12.3 | N_Shore |
cg25149751 | PPP2R2B | 5q32 | Transcrition Start Site |
cg01993576 | SLC29A1 | 6p21.1 | S_Shore |
cg16323034 | Intergenic | 6p21.2 | Unclassified |
cg08576623 | BRPF3 | 6p21.31 | S_Shore |
cg24536691 | VPS52 | 6p21.32 | Transcrition Start Site |
cg03891050 | LSM2 | 6p21.33 | S_Shore |
cg17718302 | H3C12 / H2AC17 / H2BC17 | 6p22.1 | Transcrition Start Site |
cg02959285 | HIST1H2BG | 6p22.2 | Transcrition Start Site |
cg07090714 | Intergenic | 6p25.1 | Unclassified (cell-tye specific) |
cg23448978 | COBL | 7p12.1 | Gene Body |
cg27377289 | UMAD1 | 7p21.3 | Unclassified (cell-tye specific) |
cg09926212 | ORAI2 | 7q22.1 | Transcrition Start Site |
cg02514021 | LINC-PINT | 7q32.3 | CpG Island |
cg04301738 | LINC00996 | 7q36.1 | Unclassified |
cg08261702 | RP11-511P7.5 | 7q36.1 | N_Shore |
cg13072214 | PARP10 | 8q24.2 | Transcrition Start Site |
cg00470505 | DIPK1B / AGPAT2 | 9q34.3 | CpG Island |
cg03180426 | SAPCD2 | 9q34.3 | CpG Island |