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Fig. 6 | Clinical Epigenetics

Fig. 6

From: Tissue of origin prediction for cancer of unknown primary using a targeted methylation sequencing panel

Fig. 6

Cancer type classification accuracy of the Infinium 450 K array testing datasets. A Sample number and prediction accuracy (%) of nine cancer types. B Confusion matrix (in percent) of the cancer type prediction using 200 selected probes for testing datasets generated by infinium 450 K methylation array. The percentages of correctly predicted samples are highlighted in green; misclassification events are highlighted in pink. True histology/predicted histology is respectively listed in rows/columns. BLCA Bladder urothelial carcinoma, BRCA Breast invasive carcinoma, CESC Cervical squamous cell carcinoma and endocervical adenocarcinoma; CRC Colorectal cancer, HN/ESCC Head and neck squamous carcinoma and esophageal squamous cell carcinoma, LIHC Liver hepatocellular carcinoma, LUAD Lung adenocarcinoma, LUSC Lung squamous cell carcinoma, PAAD Pancreatic adenocarcinoma, PRAD Prostate adenocarcinoma, SARC Sarcoma, TGCT Testicular germ cell tumors, THYM Thymoma, UC Uterine cancer, Upper GI Upper gastrointestinal adenocarcinoma

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Clinical Epigenetics

ISSN: 1868-7083

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