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Table 5 Insulin and obesity-related associations reported at the 10 IR-associated blood DNA methylation markers identified in the Framingham Heart Study

From: Multi-tissue epigenetic analysis identifies distinct associations underlying insulin resistance and Alzheimer’s disease at CPT1A locus

CpG marker

Closest gene (bp distance)

CpG–trait association previously reported

Reference (PMIDs)

cg17901584

DHCR24 (785)

Fasting insulin (FI), metabolic syndrome, waist circumference (WC), high density lipoprotein cholesterol (HDL-C), triglycerides (TG), body mass index (BMI), hepatic fat

31197173 (negative association), 33239708, 29,762,635, 25935004, 28194238, 28095459, 29278407, 28002404, 28213390, 27350042, 34183656, 30936141

cg15150970

DNMT3A (0)

FI

31197173 (positive association)

cg22948094

CTNNB1 (64,025)

Not previously reported

 

cg12729894

MOB2/CTSD (0)

FI

Negative association (identified in a large meta-analysis from CHARGE cohorts – personal communication; not published)

cg27640302

TIMM10 (0)

Not previously reported

 

cg00574958

CPT1A (0)

FI, fasting glucose, BMI, TG, VLDL-C WC, T2D, plasma adiponectin, carbohydrate and fat intake, blood pressure, hepatic fat, metabolic syndrome

31197173 (negative association), 29278407, 28,213,390, 26110892, 32901515, 29099282, 29762635, 25935004, 28173150, 28002404, 24920721, 28194238, 25583993, 33622391, 28139377, 32930325, 29198723, 36345830, 27350042, 34183656, 31506343, 30936141, 26808626

cg17058475

CPT1A (0)

FI, BMI, TG, VLDL-C, blood pressure, metabolic syndrome

31197173 (negative association), 29,278,407, 28213390, 24920721, 28194238, 36345830, 27350042, 28095459, 34183656, 26808626

cg24590708

MYO5C (0)

FI, BMI driving changes in DNA methylation

31,510,868, 31,197,173 (positive association)

cg11024682

SREBF1 (0)

FI, BMI, fasting glucose, WC, T2D, TG, LDL-C, HDL-C, hepatic fat

31197173 (positive association), 29,278,407, 27019061, 28173150, 28213390, 28194238, 25583993, 25935004, 34670603, 29762635, 29099282, 27350042, 34183656, 31506343, 30936141

cg06500161

ABCG1 (0)

FI, HOMA-IR, TG, BMI, HDL-C, T2D, hepatic fat

31197173 (positive association), 27019061, 24170695 (positive association), 28213390, 29278407, 28213390, 33239103, 33622391, 28194238, 27350042, 34183656, 31506343, 30936141

  1. IR Insulin resistance, EWAS Catalog, the MRC–IEU catalog of epigenome-wide association studies [108]