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Table 1 The clinicopathological and demographic characteristics of study patients

From: Genome-wide DNA methylation profiling of HPV-negative leukoplakia and gingivobuccal complex cancers

 

Training set

Validation set

Leukoplakia (n = 22)

OSCC (n = 74)

OSCC (n = 127)

Age at diagnosis

Median age

43

52.5

53

Range (IQR)

40–52.25

43–62

44–61

Sex

Male

20 (90.9%)

56 (75.7%)

108 (85%)

Female

2 (9.1%)

18 (24.3%)

19 (15%)

Pathological stage

Stage 1 and 2 (Early stage OSCC)

NA

28 (37.8%)

44 (34.6%)

Stage 3 and 4 (Advanced stage OSCC)

NA

46 (62.2%)

83 (65.4%)

Pathological T classification

T1

NA

5 (6.8%)

27 (21.3%)

T2

NA

34 (45.9%)

42 (33.1%)

T3

NA

3 (4.1%)

4 (3.1%))

T4

NA

32 (43.2%)

54 (42.5%)

Pathological cervical lymph node involvement

Node negative (N0)

NA

46 (62.2%)

75 (59.1%)

Node positive (N+)

NA

28 (37.8%)

52 (40.9%)

Pathological grade

Hyperplasia

18 (81.8%)

NA

NA

Mild dysplasia

2 (9.1%)

NA

NA

Moderate dysplasia

2 (9.1%)

NA

NA

Well

NA

7 (9.5%)

10 (7.9%)

Moderate

NA

47 (63.5%)

97 (76.4%)

Poor

NA

20 (27%)

20 (15.7%)

Habit profile

Exclusive tobacco users

7 (31.8%)

51 (68.9%)

69 (54.3%)

Exclusive smoker

3 (13.6%)

1 (1.4%)

NA

Exclusive alcohol drinker

NA

NA

1 (0.8%)

Mixed habit**

8 (36.4%)

14 (18.9%)

34 (26.8%)

No Habit

NA

NA

3 (2.4%)

No information

4 (18.2%)

8 (10.8%)

20 (15.7%)

  1. All the samples belongs to gingivobuccal complex (GBC) of oral cavity
  2. T, Tumor classification based on size; N, Tumor classification based on lymph node metastasis
  3. *IQR, Inter qaurtile range
  4. **Mixed Habit: Tobacco chewing along with bidi/cigarette smoking and/or alcohol users