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Fig. 1 | Clinical Epigenetics

Fig. 1

From: The ENmix DNA methylation analysis pipeline for Illumina BeadChip and comparisons with seven other preprocessing pipelines

Fig. 1

Distribution of mean-centered correlations (A), absolute differences (B), and ICC (C) calculated for Illumina 450 K (125 pairs) and EPIC (123 pairs) DNA methylation BeadChip in raw data and preprocessed data using various pipelines. Higher correlation, lower difference, and higher ICC indicate better performance. More detailed results are shown as violin plots in Additional file 1: Fig. S1. Paired samples Wilcoxon test P values comparing ENmix versus other pipeline distributions are shown in Additional file 1: Table S4

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Clinical Epigenetics

ISSN: 1868-7083

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