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Table 3 CpG-sites with genome-wide significant association with baseline aortic diameters (p < 10–6)

From: Genome-wide methylation patterns in Marfan syndrome

Aorta diameter

CpG

CHR

Position

Strand

Gene

UCSC_CpG_Islands_Name

β value

SE

p value

Cardiovascular function

Aortic root

cg20074307

14

55,092,491

F

SAMD4A

 

− 7.328698

1.42835322

7.81E−07

 

Ascending aorta

cg25190999

2

8,826,175

F

 

chr2: 8825106–8826188

− 7.3255838

1.41517063

6.33E−07

 

Aortic arch

cg13399952

9

132,652,889

F

FNBP1

chr9: 132652350–132652715

3.259245

0.59292635

1.39E−07

 

Proximal desc aorta

cg22162225

2

62,932,835

R

EHBP1

chr2: 62932595–62933353

− 3.9168576

0.75191428

5.44E−07

 

Proximal desc aorta

cg04258811

15

84,976,641

F

 

chr15: 84976070–84977044

2.73851672

0.47139499

3.02E−08

 

Aorta at diaphragm

cg11825706

1

201,552,873

R

  

− 2.9891322

0.55625272

2.51E−07

 

Aorta at diaphragm

cg10045864

2

240,036,897

F

HDAC4

chr2: 240033147–240033453

− 5.1346472

0.89881755

4.87E−08

Cardiac hypertrophy and remodeling

          

Aortic aneurysm formation

          

Vascular dysfunction

Aorta at diaphragm

cg18487516

6

3,849,542

F

FAM50B

chr6: 3849271–3851048

− 6.2306009

1.03917257

1.18E−08

 

Aorta at diaphragm

cg07829265

7

4,308,166

F

SDK1

chr7: 4303079–4305062

− 3.9305036

0.62392327

2.47E−09

Hypertension

Aorta at diaphragm

cg05852760

7

23,508,224

F

IGF2BP3

chr7: 23508184–23509712

− 3.0209111

0.52917492

4.97E−08

Congenital heart disease

Aorta at diaphragm

cg21375490

7

157,411,039

F

PTPRN2

chr7: 157409846–157410241

− 4.9468079

0.95539399

6.29E−07

Future myocardial infarction

Aorta at diaphragm

cg07701530

10

22,911,629

F

PIP4K2A

 

− 1.862081

0.29196299

1.64E−09

 

Aorta at diaphragm

cg26558664

11

18,230,491

F

LOC494141

chr11: 18230619–18230906

− 1.1258168

0.18214965

4.58E−09

 

Aorta at diaphragm

cg04838249

12

34,500,640

F

 

chr12: 34500550–34500814

3.92396387

0.65291884

1.10E−08

 

Aorta at diaphragm

cg05265042

14

102,030,999

F

DIO3

chr14: 102025989–102031567

2.89385142

0.54443147

3.31E−07

Heart failure

          

Ventricular remodeling

Aorta at diaphragm

cg09689342

16

5,077,985

F

NAGPA

 

− 4.945524

0.75454621

6.42E−10

 

Aorta at diaphragm

cg02472906

16

87,938,341

F

CA5A

 

− 5.0764489

0.84196725

9.96E−09

 

Aorta at diaphragm

cg06906965

19

58,450,175

R

 

chr19: 58446336–58446800

− 3.9017762

0.73555419

3.48E−07

 

Aorta at diaphragm

cg27614967

23

153,561,283

F

 

chrX: 153561035–153561361

− 5.0488276

0.87988599

4.30E−08

 

Aorta at bifurcation

cg24073777

1

10,832,698

F

CASZ1

 

− 9.4883778

1.54559989

5.68E−09

Congenital heart disease

          

Hypertension

Aorta at bifurcation

cg03158772

3

14,768,188

F

C3orf20

 

− 6.4625567

1.0591771

6.89E−09

 

Aorta at bifurcation

cg24324446

3

110,363,281

F

  

− 4.3209801

0.79936682

2.16E−07

 

Aorta at bifurcation

cg05149776

5

140,870,164

R

PCDHGA1

chr5: 140871064–140872335

− 5.8834917

1.0294066

4.81E−08

Atherosclerosis

Aorta at bifurcation

cg24588058

7

76,591,673

F

 

chr7: 76588998–76589608

− 4.9102623

0.94591786

5.91E−07

 

Aorta at bifurcation

cg19804570

18

44,618,587

R

KATNAL2

 

− 5.4528539

1.01978524

2.85E−07

 

Aorta at bifurcation

cg18075379

20

61,788,662

F

 

chr20: 61788160–61788669

− 5.1667712

0.95877471

2.34E−07

 

Aorta at bifurcation

cg14798310

22

24,234,197

F

MIF-AS1

chr22: 24236257–24237539

− 4.8972641

0.88169036

1.06E−07

 

Aorta at bifurcation

cg27504079

23

50,653,533

R

BMP15

 

− 3.9887835

0.65665158

7.91E−09

 
  1. In yellow the significant associations with p < 10–8