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Table 3 Summary of cord blood differentially methylated regions (Sidak p < 0.05) associated with individual metals

From: Prenatal metal exposure, cord blood DNA methylation and persistence in childhood: an epigenome-wide association study of 12 metals

 

All infants (N = 361)

Female (N = 169)

Male (N = 192)

Number of DMRs

Genes

Number of DMRs

Genes

Number of DMRs

Genes

As

1

LOC144571

2

CAT

3

LDHC; LOC144571; OXT

Ba

0

 

2

GSDMD; VENTX

2

DDX60; LOC619207

Cd

4

HOXB7

2

HOXA11

3

HIST1H1A; SLC17A9

Cr

3

B3GALT4; DLC1; TCF7L2

2

DLC1

0

 

Cs

18

ZBTB38; CMYA5; VARS2; GTF2H4; PPP1R2P1; TAPBP; LYNX1; RAD52; PUS7L; IRAK4; ZNF385A; MIR548H4; NOX5; RAI1; SKAP1; SLC44A2; GNAS; GNASAS

3

STMN1; GOPC; IRAK4; PUS7L

14

ZBTB38; VARS2; GTF2H4; LRRC27; WSCD2; MIR548H4; NOX5; RAI1

Cu

3

INO80B; HNRPA1L-2; HNRNPA1; CBX5; GNAS; GNASAS

1

GNAS; GNASAS

6

NTNG1; PRSS50; HAPLN1; PPP1R2P1; HNRPA1L-2; HNRNPA1; CBX5

Hg a

2

RNF39; LYNX1

0

 

3

RNF39; LYNX1

Mg

5

FLJ42875; RNF39; TNXB; B4GALNT4; GNAS; GNASAS

3

CRIP2; WFIKKN2; GNAS; GNASAS

1

AURKC

Mn

1

TNXB

7

SUCLG2; HLTF; AGPAT4; CARD11; HOXA4; OXGR1

3

TTC23; BLCAP; NNAT

Pb

0

 

0

 

2

SEMA5B

Se

2

PF4; GSDMD

3

GSDMD; CYP1A1; ADAMTSL5

1

AURKC

Zn

5

COL7A1; MTNR1B; CACNA2D4; FSCN2; LOC284798

0

 

3

TMEM88B; MCC

  1. Differentially methylated regions (DMRs) identified using models of individual log2-transformed prenatal metal concentrations adjusted for infant sex, race/ethnicity, gestational age, nulliparous, maternal age at enrollment, pre-pregnancy BMI, education, smoking, household income, and estimated cord blood cell-type proportions
  2. aAll infants: N = 358; female: N = 167; male: N = 191