Table 3 Univariable Cox proportional hazards regression survival analyses of different NEFM DNA methylation loci in TCGA BRCA HumanMethylation450K platform
From: NEFM DNA methylation correlates with immune infiltration and survival in breast cancer
VarNames | UCSC_RefGene_Group | Relation_to_UCSC_CpG_Island | HR | CI95 | p |
|---|---|---|---|---|---|
NEFMmet |  |  | 1.6 | 1.03–2.48 | 0.036 |
cg01583969 | 5'UTR;Body | S_Shore | 1.47 | 0.95–2.28 | 0.086 |
cg02002551 | 5'UTR;Body | S_Shore | 1.14 | 0.74–1.76 | 0.545 |
cg02106941 | TSS1500;1stExon | Island | 0.97 | 0.63–1.49 | 0.888 |
cg02761376 | TSS1500;1stExon | Island | 1.56 | 1.01–2.42 | 0.045 |
cg03012544 | Body;Body | S_Shore | 1.14 | 0.74–1.75 | 0.555 |
cg03169018 | TSS200;Body | Island | 1.2 | 0.78–1.84 | 0.412 |
cg04118306 | TSS200;1stExon | Island | 0.97 | 0.63–1.49 | 0.885 |
cg07502389 | TSS200;TSS1500 | Island | 1.76 | 1.14–2.74 | 0.012 |
cg07552803 | TSS1500;1stExon | Island | 1.31 | 0.85–2.02 | 0.216 |
cg09234518 | TSS200;TSS1500 | Island | 1.96 | 1.25–3.07 | 0.003 |
cg12026749 | 5'UTR;Body | S_Shore | 1.24 | 0.8–1.9 | 0.335 |
cg13387869 | 3'UTR;3'UTR | S_Shelf | 0.84 | 0.55–1.29 | 0.424 |
cg16459364 | TSS200;TSS1500 | Island | 1.14 | 0.74–1.76 | 0.557 |
cg17078116 | TSS200;1stExon | Island | 1.11 | 0.72–1.7 | 0.647 |
cg18267374 | TSS1500;5'UTR;1stExon | Island | 1.75 | 1.13–2.72 | 0.013 |
cg18898125 | TSS1500 | N_Shore | 1.22 | 0.79–1.87 | 0.368 |
cg19677607 | TSS200;1stExon | Island | 1.6 | 1.03–2.48 | 0.038 |
cg20585869 | TSS200;1stExon | Island | 0.78 | 0.5–1.2 | 0.261 |
cg22562942 | TSS200;1stExon | Island | 1.35 | 0.87–2.1 | 0.181 |
cg23290344 | TSS1500;1stExon | Island | 1.34 | 0.87–2.06 | 0.188 |
cg24705551 | Body;Body | S_Shelf | 1.12 | 0.73–1.72 | 0.596 |
cg26330518 | TSS1500 | N_Shore | 1.56 | 1.01–2.41 | 0.044 |
cg26980244 | 5'UTR;1stExon;Body | Island | 1.42 | 0.92–2.19 | 0.116 |
cg27475652 | Body;Body | S_Shelf | 1.04 | 0.67–1.6 | 0.867 |