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Table 4 44 CpGs associated with AGA vs. SGA when treats birthweight as categorical variable. The coefficient estimates are the difference in % of methylation per AGA vs. SGA. In bold the CpG with the strongest effect

From: Birthweight DNA methylation signatures in infant saliva

CpG

Chromosome

Gene allocation or nearest gene

Effect estimate

Standard error

Nominal p-value

FDR corrected p-value

cg26168577

17

MRC2

1.374

2.17E−03

5.36E−09

0.002

cg03066788

8

PNOC

− 2.371

3.92E−03

2.07E−08

0.004

cg26615232

1

USH2A

− 1.304

2.31E−03

1.3E−07

0.017

cg12055114

19

LMNB2

0.898

1.62E−03

2.18E−07

0.017

cg04873627

4

TBC1D19

1.771

3.20E−03

2.3E−07

0.017

cg15225594

5

20 kb down ERCC8

2.016

3.68E−03

2.76E−07

0.017

cg01286950

2

AFF3

− 0.747

1.37E−03

3.4E−07

0.017

cg18072629

10

GATA3-AS1

0.715

1.32E−03

3.62E−07

0.017

cg13984701

9

COL5A1

4.051

7.49E−03

3.88E−07

0.017

cg26332310

1

BARHL2

− 1.867

3.47E−03

4.39E−07

0.017

cg24391471

3

ZDHHC3

− 0.829

1.55E−03

4.84E−07

0.017

cg02547025

2

LBH

− 0.517

9.69E−03

5.26E−07

0.017

cg23508813

3

2.5 kb down LOC100507274

2.372

4.45E−03

5.33E−07

0.017

cg26589351

17

SPOP

− 1.370

2.58E−03

5.97E−07

0.018

cg06234201

16

DUS2

2.202

4.16E−03

6.49E−07

0.018

cg23954819

12

BRI3BP

− 2.136

4.06E−03

7.26E−07

0.019

cg19445996

17

RAB37

− 0.744

1.42E−03

7.85E−07

0.019

cg02980127

14

14,5 kb down ENSG00000258736.1

1.402

2.70E−03

9.4E−07

0.022

cg22869025

20

ACSS1

0.629

1.22E−03

1.14E−06

0.025

cg19403534

10

PRLHR

1.688

3.28E−03

1.22E−06

0.025

cg12322146

3

125 kb down RBMS3

4.106

8.01E−03

1.31E−06

0.025

cg06458489

5

150 kb down SNORA63

− 0.999

1.95E−03

1.38E−06

0.025

cg00383136

6

HLA-DRA

1.370

2.68E−03

1.39E−06

0.025

cg16899265

18

GRP

− 1.257

2.47E−03

1.59E−06

0.027

cg15847996

10

INPP5A

2.390

4.71E−03

1.61E−06

0.027

cg08715720

5

PPP2R2B

0.780

1.55E−03

1.83E−06

0.030

cg20388707

2

NGEF

1.510

3.03E−03

2.31E−06

0.036

cg01504555

16

SYCE1L

− 0.766

1.54E−03

2.4E−06

0.036

cg07965823

14

ISM2

− 0.820

1.65E−03

2.64E−06

0.036

cg20244295

15

ZNF710

1.049

2.12E−03

2.65E−06

0.036

cg09311778

17

2 kb down KAT7

− 0.795

1.61E−03

2.78E−06

0.036

cg05754929

16

GSE1

− 1.993

4.03E−03

2.81E−06

0.036

cg18246134

3

LINC02877

− 0.767

1.55E−03

2.85E−06

0.036

cg21688288

21

PDE9A

1.994

4.05E−03

3.08E−06

0.038

cg22159939

1

30 kb down CENPF

− 1.137

2.32E−03

3.49E−06

0.042

cg25271404

15

GOLGA8B

− 0.617

1.26E−03

3.62E−06

0.042

cg24745895

7

5 kb up AKR1D1

0.669

1.38E−03

4.01E−06

0.044

cg17836487

2

TMEM131

− 1.328

2.73E−03

4.07E−06

0.044

cg24113784

17

MIEF2

1.050

2.16E−03

4.08E−06

0.044

cg00701706

17

OTOP3

− 1.747

3.62E−03

4.57E−06

0.048

cg24663455

10

50,5 kb down MGMT

− 1.615

3.35E−03

4.73E−06

0.048

cg08935613

11

HYLS1

− 0.720

1.50E−03

4.83E−06

0.048

cg22213242

11

CD248

1.191

2.48E−03

4.91E−06

0.048

cg24420742

12

NAV3

1.994

4.15E−03

4.96E−06

0.048