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Table 2 Smoking-related disease GWAS SNPs associated with methylation and gene expression

From: Epigenome-wide association study of whole blood gene expression in Framingham Heart Study participants provides molecular insight into the potential role of CHRNA5 in cigarette smoking-related lung diseases

SNPs

Trait

SNP-associated CpG sites

Beta of SNP-CpG association

SNP-associated expression of genes

Beta of SNP–gene expression association

Beta of CpG–gene expression association

rs8034191

Lung cancer

cg19696491

0.011

CHRNA5

0.052

0.71

rs17486278 (rs11858836

rs8034191)

Chronic obstructive pulmonary disease

cg22563815

0.013

0.05

0.88

rs57221529

Lung disease severity in cystic fibrosis

cg26850624

0.030

AHRR

0.26

1.81

rs1056562

Lung adenocarcinoma

cg03234777

0.0097

AMICA1

0.15

1.51