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Table 1 Genomic localization and functional annotation of the 6 CpG sites shown in Fig. 2a

From: Genome-wide DNA methylation profiling is able to identify prefibrotic PMF cases at risk for progression to myelofibrosis

Chr Name Localization Associated gene   Coefficient for LDM
16 cg03983220 OpenSea None    − 7.431161
10 cg11628316 Island NM_001008541 Max-interacting protein 1  − 44.910325
2 cg08880875 N_Shore NM_138804 Meiosis 1 Associated Protein  − 11.469252
13 cg21459486 OpenSea none    − 9.140643
16 cg05972185 OpenSea NM_001164766 Zinc finger homeobox 3 6.017707
19 cg18376352 Island NM_004750 Cytokine Receptor-Like Factor 1 12.946803
  1. For the definition and nomenclature of CpG islands, shores, open sea, and shelves, see [49, 50]
  2. LDM Linear discriminant model
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Clinical Epigenetics

ISSN: 1868-7083

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