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Table 1 PM20D1 mQTL region genes and SNPs and their DNA methylation correlation obtained from the Hannon database

From: Comprehensive analysis of PM20D1 QTL in Alzheimer’s disease

 CpGrs1172198rs708727rs823082rs823088rs1361754rs960603MinMaxDelta
NUCKS1----------
RAB7L1----------
SLC41A1cg23034840-7.60E−08-2.90E−05--792
PM20D1cg07157834-3.60E−22----83907
PM20D1cg245034074.60E−081.90E−257.20E−16-7.20E−161.80E−12608727
PM20D1cg071678722.80E−075.00E−267.00E−164.10E−106.90E−161.90E−13417938
PM20D1cg119659132.30E−112.30E−372.50E−191.50E−102.50E−191.30E−14157560
PM20D1cg148931611.30E−124.30E−347.00E−191.30E−097.00E−191.40E−13177053
PM20D1cg141596721.30E−083.00E−303.20E−181.20E−103.20E−183.10E−13228765
PM20D1cg263540171.40E−095.60E−332.10E−184.50E−102.10E−181.10E−14128371
PM20D1cg171789007.00E−081.20E−191.20E−13-1.20E−134.10E−09408747
  1. Values represent CpG DNA methylation and SNP correlation Bonferroni-corrected p values from Hannon et al. [14], n = 166 prefrontal cortex samples (https://epigenetics.essex.ac.uk/mQTL/). Min lowest value, Max highest value, Delta highest − lowest values. Significantly differentially probes for each gene are represented. “-,” not significant