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Table 1 Clinical and pathological features of the study participants from the MCCS and TCGA

From: Association of variably methylated tumour DNA regions with overall survival for invasive lobular breast cancer

Sample characteristics

MCCS N = 130

TCGA N = 168

P value

Median age at diagnosis (years), interquartile range

65 [25%; 58]

62 [25%; 51]

0.02

 < 50 years (n, %)

6 (5)

35 (21)

0.0002

 50–60 years (n, %)

39 (30)

35 (21)

 

 60+ years (n, %)

85 (65)

98 (58)

 

Year of diagnosis (n, %)

 1992–1996

18 (14)

0 (0)

4.4 × 10−30

 1997–2001

47 (36)

4 (2)

 

 2002–2005

36 (28)

15 (9)

 

 2006 and later

29 (22)

147 (86)

 

 Missing

0 (0)

2 (1)

 

Overall deaths (n, %)

37 (28)

14 (8)

4.7 × 10−06

Median follow-up time (years)

13

2

2.2 × 10−16

Tumour grade (n, %)

 Grade I

13 (10)

NA

NA

 Grade II

80 (61)

NA

 

 Grade III

17 (13)

NA

 

 Missing

20 (15)

NA

 

Tumour stage (n, %)

 1A/1B

65 (50)

20 (12)

1.9 × 10−12

 2A/2B

48 (37)

92 (55)

 

 3A/3C/4

17 (13)

55 (33)

 

 Missing

0 (0)

1 (0.5)

 

Tumour ER expression (n, %)

 Positive

121 (93)

157 (93)

0.32

 Negative

8 (6)

6 (4)

 

 Missing

1 (1)

5 (3)

 

Tumour PR expression (n, %)

 Positive

94 (72)

140 (83)

0.004

 Negative

35 (27)

22 (13)

 

 Missing

1 (1)

6 (4)

 

Tumour HER2 expression (n, %)

 Positive

11 (8)

21 (13)

1.5 × 10−5

 Negative

92 (71)

84 (50)

 

 Equivocal

5 (4)

35 (21)

 

 Missing

22 (17)

28 (17)

 
  1. ER oestrogen receptor, PR progesterone receptor, HER2 human epidermal growth factor receptor 2
  2. P = values are for chi-square tests and T-tests for categorical and continuous variables, respectively