Table 3 Genes linked to promoter regions associated with the top DMFs
Gene ID | CpGs | Control % | Patient % | Difference | P value | F test value |
|---|---|---|---|---|---|---|
LOC339166 | 11 | 75 | 33 | − 42 | 6.85 × 10–3 | F(1,14) = 10.03 |
LOC339166 | 8 | 80 | 46 | − 34 | 3.78 × 10–3 | F(1,14) = 12.02 |
ZNF876P | 15 | 53 | 31 | − 22 | 8.28 × 10–3 | F(1,13) = 9.68 |
RAB20 | 5 | 42 | 25 | − 17 | 5.20 × 10–3 | F(1,16) = 10.46 |
NUDT14 | 3 | 38 | 21 | − 17 | 5.30 × 10–3 | F(1,14) = 10.87 |
MIR138-2 | 5 | 78 | 62 | − 16 | 2.23 × 10–2 | F(1,14) = 6.59 |
ZNF714 | 6 | 12 | 42 | + 30 | 1.12 × 10–2 | F(1,16) = 8.22 |
C8orf31 | 3 | 43 | 64 | + 21 | 4.75 × 10–2 | F(1,13) = 4.79 |
PAX8-AS1 | 7 | 65 | 83 | + 18 | 3.07 × 10–2 | F(1,15) = 5.69 |
CCDC144NL | 8 | 58 | 75 | + 17 | 3.36 × 10–2 | F(1,16) = 5.41 |
LINC00923 | 4 | 60 | 76 | + 16 | 6.79 × 10–3 | F(1,17) = 9.49 |
WNK2 | 17 | 38 | 54 | + 16 | 1.12 × 10–2 | F(1,16) = 8.22 |