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Table 3 Mendelian randomization (MR) analysis results, assessing epigenetic mediation between alcohol consumption and ~ 3-year survival at the KHDC3L gene (chromosome 6:74072255-74072376). Inverse-variance weighted adjusted for genetic correlation between mQTLs (IVW), MR Egger and Wald ratio results are each reported as hazard ratios with 95% confidence intervals

From: Identifying epigenetic biomarkers of established prognostic factors and survival in a clinical cohort of individuals with oropharyngeal cancer

Region (gene)

MR method

SNPs

HR

95% CI

P

All DMR CpGs

 Chr6:74072255-74072376 (KHDC3L)

IVW

4

1.17

0.70 to 1.97

0.55

 Chr6:74072255-74072376 (KHDC3L)

MR Egger

4

0.89

0.27 to 2.98

0.85

Sentinel CpG only

 cg19146112 (KHDC3L)

Wald ratio

1

1.17

0.54 to 2.53

0.68