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Table 2 Methylation levels (Δβ value) in all 6 significant upregulated CpGs in all subjects (n = 10)

From: Genome-wide analysis of constitutional DNA methylation in familial melanoma

CpG IDGene IDBIOS control casesFamily IFamily IIFamily IIIFamily IVFamily V
I_1I_2II_1II_2III_1III_2IV_1IV_2V_1V_2
β valueaΔβ valueb
cg21812670RABGGTB0.060.300.380.340.300.360.260.390.320.390.30
cg26642667SND10.060.250.300.330.220.350.160.370.290.340.27
cg04385631SCAF110.020.140.000.000.220.000.220.230.000.220.28
cg21843755ZNF6380.110.160.210.180.070.200.100.210.160.230.21
cg03301282THAP10.080.260.230.200.270.250.120.290.270.300.24
cg02470959SFSWAP0.050.180.200.180.160.190.170.210.210.200.17
  1. aRepresents the average β value for the 1000 BIOS controls at each CpG site
  2. bRepresents the difference between BIOS average β value and patient β value at each CpG site