Table 1 Altered CGI flanking region in pilocytic astrocytoma
From: Clustered protocadherins methylation alterations in cancer
UCSC CGI | UCSC CGI name | CTCF binding site | Relation to UCSC CGI | Δβ value (PA-control) | Genes within region | Gene promoter-associated N-shelf |
|---|---|---|---|---|---|---|
chr5:140871064-140872335 | CpG 122 | chr5:140870147-140872480 | N-shelf | − 0.285 | PCDHGA1, PCDHGA10, PCDHGA11, PCDHGA12, PCDHGA2, PCDHGA3, PCDHGA4, PCDHGA5, PCDHGA6, PCDHGA7, PCDHGA8, PCDHGA9, PCDHGB1, PCDHGB2, PCDHGB3, PCDHGB4, PCDHGB5, PCDHGB6, PCDHGB7, PCDHGC3, PCDHGC4, PCDHGC5 | PCDHGC5 |
chr5:140871308-140873492 |