Skip to main content

Table 2 Primer list for PCR of BSgDNA

From: Increased methylation upstream of the MEG3 promotor is observed in acute myeloid leukemia patients with better overall survival

Locus

1st PCR primer pair (5′-3′)

2nd PCR primer air (5′-3′)

IGF2-H19 ICR

F–AGGTGTTTTAGTTTTATGGATGATGG [47]

R–TCCCATAAATATCCTATTCCCAAATAACC [47]

F–TGTATAGTATATGGGTATTTTTGGAGGTTT [47]

R–TCCCATAAATATCCTATTCCCAAATAACC [47]

DLK1-MEG3 IG-DMR (CG6)

F–TGGGAATTGGGGTATTGTTTATAT

R–AAACAATTTAACAACAACTTTCCTC

F–GTTAAGAGTTTGTGGATTTGTGAGAAATG [39]

R–CTAAAAATCACCAAAACCCATAAAATCAC [39]

MEG3 DMR (CG7)

F–TTATTTTTTTGAATAATAAGAGAAAGTATG

R–CTCATTTCTCTAAAAATAATTAACC

F–TTATTTTTTTGAATAATAAGAGAAAGTATG R–CCCCAAATTCTATAACAAATTACT [39]

MEG3 promotor (CG9)

F–TGAGGAAGTAGGGGTTTATAGAGAG

R–AACCCTACAACCCCACAAAA [39]

F–GGAGAGTGGGGTTTATTGTGAA [39]

R–AACCCTACAACCCCACAAAA [39]

MEG3 intragenic (CG8)

F–GTTTGAGATTTGTTGGGTATTT [39]

R–AATTTAACTAACAAATCACAAATATTAACT

F–GTTTGAGATTTGTTGGGTATTT [39]

R–AATTTAACTAACAAATCACAAATATTAACT

ZAC DMR

F–GGGGTAGTYGTGTTTATAGTTTAGTA [48]

R–CRAACACCCAAACACCTACCCTA [48]

F–GGGGTAGTYGTGTTTATAGTTTAGTA [48]

R–CRAACACCCAAACACCTACCCTA [48]

PEG1 DMR

F–TTGTTGGTTAGTTTTGTAYGGTT [47]

R–AAAAATAACACCCCCTCCTCAAAT [47]

F–TTGTTGGTTAGTTTTGTAYGGTT [47]

R–CCCAAAAACAACCCCAACTC [47]

PEG3 DMR

F–AAAAGGTATTAATTATTTATAGTTTGGT [49]

R–AAAAATATCCACCCTAAACTAATAA [49]

F–AAAAGGTATTAATTATTTATAGTTTGGT [49]

R–AAAAATATCCACCCTAAACTAATAA [49]