Table 2 List of 246 significant SNP-CpG pairs (chromosomal and CpG sites positions were based on GRCh37/hg19)

1

AVPR1B

cg09069072

15,482,754

13

5

GFI1

cg09662411

92,946,132

10

2

cg09935388

92,947,588

10

2

cg10399789

92,945,668

9

6

cg12876356

92,946,825

10

2

cg18146737

92,946,701

10

2

cg18316974

92,947,035

10

2

GNG12

cg25189904

68,299,493

5

2

NOS1AP

cg11231349

162,050,657

4

2

TMEM51

cg21913886

15,485,346

14

9

unassigned

cg03547355

227,003,061

8

2

unassigned

cg12547807

9,473,751

9

1

unassigned

cg21393163

12,217,630

8

2

unassigned

cg26764244

68,299,511

3

3

2

2q37.1

cg05951221

233,284,402

5

1

cg03329539

233,283,329

5

2

ALPP

cg23667432

233,244,439

5

2

NFE2L2

cg26271591

178,125,956

8

6

SNED1

cg26718213

241,976,081

9

4

unassigned

cg27241845

233,250,371

5

2

3

GPX1

cg18642234

49,394,623

10

5

5

AHRR

cg03604011

400,201

15

5

cg03991871

368,448

9

1

cg11902777

368,843

9

4

cg12806681

368,395

9

2

cg14817490

392,920

15

4

cg17287155

393,347

15

1

cg23576855

373,300

9

7

cg23916896

368,805

9

4

6

6p21.33

cg06126421

30,720,081

16

8

CDKN1A

cg15474579

36,645,813

22

8

IER3

cg15342087

30,720,210

16

2

cg24859433

30,720,204

16

3

TIAM2

cg00931843

155,442,993

6

1

VARS

cg17619755

31,760,629

16

8

unassigned

cg14753356

30,720,109

8

2

7

C7orf40

cg03440944

45,023,330

5

1

CNTNAP2

cg11207515

146,904,206

14

7

cg25949550

145,814,306

11

8

GNA12

cg19717773

2,847,554

22

22

HOXA7

cg08396193

27,193,709

7

1

LRRN3

cg11556164

110,738,316

5

5

MYO1G

cg12803068

45,002,919

10

1

cg22132788

45,002,487

10

1

TNRC18

cg09022230

5,457,226

24

3

8

ZC3H3

cg26361535

144,576,604

8

1

unassigned

cg19589396

103,937,374

15

2

9

unassigned

cg01692968

108,005,349

2

2

10

ARID5B

cg25953130

63,753,550

6

3

11

KCNQ1

cg07123182

2,722,391

13

2

cg26963277

2,722,408

13

3

cg01744331

2,722,358

13

3

KCNQ1OT1

cg16556677

2,722,402

13

2

PRSS23

cg11660018

86,510,915

9

2

cg23771366

86,510,999

9

2

unassigned

cg16611234

58,870,075

10

10

14

C14orf43

cg01731783

74,211,789

6

1

cg10919522

74,227,441

5

1

15

ANPEP

cg23161492

90,357,203

19

6

SEMA7A

cg00310412

74,724,919

13

9

16

ITGAL

cg09099830

30,485,486

3

2

XYLT1

cg16794579

17,562,419

3

1

17

LOC100130933

cg07251887

73,641,810

6

2

STXBP4

cg07465627

53,167,407

8

4

19

CPAMD8

cg15159987

17,003,890

15

4

CRTC1

cg23973524

18,873,223

12

1

F2RL3

cg03636183

17,000,586

17

1

PPP1R15A

cg03707168

49,379,127

10

4

21

ETS2

cg23110422

40,182,073

6

3

22

NCF4

cg02532700

37,257,404

8

2

590

246