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Table 3 Methylation marks that partially mediate the association between pesticide exposure and leptin and body fat accumulation in PON1-192 R-allele carriers

From: Interaction between prenatal pesticide exposure and a common polymorphism in the PON1 gene on DNA methylation in genes associated with cardio-metabolic disease risk—an exploratory study

Outcome

IlmnID

Nearest gene symbol

Gene name

Direction of methylation in exposed R carriers

Diseases

Significance of causal mediation effect (P value)

Leptin

cg03366858

LRP8

Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor

Hyper

Myocardial infarction (0.22)|nerve degeneration (0.21)|Myocardial infarction, susceptibility to, 1 (finding) (0.2)

0.02

Leptin

cg18202502

LRP8

Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor

Hyper

Myocardial infarction (0.22) | nerve degeneration (0.21)|myocardial infarction, susceptibility to, 1 (finding) (0.2)

0.024

Delta BMI Z score

cg00810945

UQCRC2

Ubiquinol-cytochrome c reductase core protein II

Hypo

Mitochondrial complex iii deficiency, nuclear type 5 (0.41) | obesity (0.21)

0.138

Delta BMI Z score

cg06337557

MTNR1B

Melatonin receptor 1B

Hypo

Diabetes mellitus, Type 2 (0.26)|polycystic ovary syndrome (0.21) | child development disorders, pervasive (0.21)|acute pancreatitis (0.1)

0.032

Delta BMI Z score

cg14152613

FABP4

Fatty acid-binding protein 4, adipocyte

Hyper

Carcinoma (0.21)|mammary neoplasms, experimental (0.21) | mammary neoplasms, animal (0.21)|insulin resistance (0.1)|erectile dysfunction (0.1)|diabetes mellitus, experimental (0.1)

0.068

Delta BMI Z score

cg15134033

GRIN2A

Glutamate receptor, ionotropic, N-methyl D-aspartate 2A

Hypo

Epilepsy (0.21)|colorectal neoplasms (0.21)|epilepsy, rolandic (0.21)|melanoma (0.21)|landau-kleffner syndrome (0.21)|autistic disorder (0.21)|morphine dependence (0.21)|language development disorders (0.21)|epilepsy, focal, with speech disorder and with or without mental retardation (0.21)|speech disorders (0.21)|substance withdrawal syndrome (0.21)|rolandic epilepsy, mental retardation, and speech dyspraxia, autosomal dominant (0.2)|reperfusion injury (0.1)|hypoxia-ischemia, brain (0.1)|sepsis (0.1)|fetal growth retardation (0.1)|central nervous system viral diseases (0.1)|placental insufficiency (0.1)

0.144

Delta BMI Z score

cg18202502

LRP8

Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor

Hyper

Myocardial infarction (0.22)|nerve degeneration (0.21)|myocardial infarction, susceptibility to, 1 (finding) (0.2)

0.026

Bodyfat

cg00810945

UQCRC2

Ubiquinol-cytochrome c reductase core protein II

Hypo

Mitochondrial complex iii deficiency, nuclear type 5 (0.41)|obesity (0.21)

0.174

Bodyfat

cg03366858

LRP8

Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor

Hyper

Myocardial infarction (0.22)|nerve degeneration (0.21)|myocardial infarction, susceptibility to, 1 (finding) (0.2)

<0.001

Bodyfat

cg18202502

LRP8

Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor

Hyper

Myocardial infarction (0.22)|nerve degeneration (0.21)|myocardial infarction, susceptibility to, 1 (finding) (0.2)

<0.001

  1. Only the subset of genes for which associations with metabolic disease have been reported is listed. DisGeNET Score—indicating reliability of the gene disease associations—is included between brackets