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Table 2 Validation of differentially methylated regions

From: Genome-wide DNA methylation profile identified a unique set of differentially methylated immune genes in oral squamous cell carcinoma patients in India

Methylation status in 450K array Overlap with CGI Gene No. of samples No. of concordant samples % of concordant samples
Hypermethylated CGI ZNF577 53 42 79.25
HLA-DPB1 51 38 74.51
LHX1 53 41 77.36
MYH14 13 11 84.62
Non-CGI ZSCAN31 47 35 74.47
LDLRAD4 53 37 69.81
LXN 53 37 69.81
Hypomethylated CGI PIWIL1 14 13 92.86
MFAP2 11 9 81.82
Non-CGI PTPN22 53 33 62.26
SPNS3 14 10 71.43
AIM2 12 10 83.33
SLAMF1 12 8 66.67
SPATA13 10 7 70.00