Fig. 3

Heat map of DNA methylation M-values in fusion-positive versus fusion-negative PCa, based on supervised clustering. The columns represent the prostate tumor samples (fusion-positive is shown under the red bar and fusion-negative is shown under the green bar). The heat map includes 3101 differentially methylated CpG sites (T2E ⁺ vs. T2E ^─) with FDR Q-value <0.00001 and a mean methylation difference of at least 10 % between tumor types (rows). Higher methylation levels are shown in red and lower methylation levels are shown in blue (white is intermediate)