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Table 2 Epigenetic treatment associated with a conventional anticancer agent

From: Epigenetic treatment of solid tumours: a review of clinical trials

Epigenetic drug

Tumour type and chemo

Results and data provided

Reference

5-azacytidine

RD 75 mg/m2/day

days 1–4 and 15–18 q 28 days

Phase I

Erlotinib 150 mg/day

Mixed tumours (30 pts)

Aza: increasing dose (75–100) and days of treatment (2–8)

Toxicity: rash, diarrhoea, nausea, and fatigue

[119]

5-azacytidine

Ovarian cancer, platinum insensitive (30 pts)

Toxicity: fatigue, myelosuppression

DR4 methylation in PBMC related to activity

[120]

5-azacytidine

75 mg/m2/day for days 1-5

Prostate cancer (22 pts)

Docetaxel (day6) , prednisone

Toxicity: myelosuppression

Reduction in GADD-45 methylation (peripheral DNA) on day 5

Only pts that had a reduction had a response.

[61]

Abexinostat

15–45 mg tid days 1-5

Sarcoma 22 pts

Doxorubicin 75 mg/m2 day 4

Neutropenia (growth factors required), fatigue, thrombocytopenia, and anemia.

PK of Abexinostat described. HDAC levels inhibited in PBMC

[121]

Belinostat

1000 mg/m2/day for 5 days

Carboplatin AUC 5 day 3

Resistant ovarian cancer (29 pts)

Toxicity: neutropenia, thrombocytopenia, vomiting

No effect, study closed

[122]

Belinostat

1000 mg/m2, 48 h c.i.

Thymic epithelial (26 pts)

Cisplatin, doxorubicin, cyclophosphamide

Toxicity: nausea, diarrhea, neutropenia, thrombocytopenia,

Immunomodulatory effect observed

[123]

Belinostat 1000 mg/m2 i.v. for days 1–3 then p.o. 2000 mg for days 4-5

Unknown primary (44 pts)

Paclitaxel, carboplatin

Randomised phase II. No clinical benefit

[124]

CI-994

6 mg/m2/day for days 1–21, 28-day cycle

Phase II Pancreas.

Gemcitabine 1000 mg/m2 days 1, 8 and 15 (174 pts)

Increased incidence of neutropenia and thrombocytopenia

No improvement of gemcitabine activity

[125]

CI-994

4–10 mg/m2/day

RD 6 mg/m2/day for days 1–14 q 21 days

Phase I

Mixed tumours (54pts)

Capecitabine 1650–2000 mg/m2/day for 14 days q 21 days

PK not altered by capecitabine.

Toxicity: Thrombocytopenia

[49]

Decitabine

45–135 mg/m2 6 h infusion for day 1

RD 90mg/m2

Phase I

Carboplatin (AUC 5 or 6) day 8

Mixed tumours (33 pts)

Dose dependent, reversible demethylation in PBMC maximally at day 10. Demethylation of the MAGE1A gene

Toxicity: myelosuppression

[42]

Decitabine

10 mg/m2/day for 5 days

Carboplatin AUC 5 day 8

Ovarian cancer (17 pts)

35% RR 10.2 months PFS

In PBMC and tumours global and gene-specific demethylation.

Demethylation of MLH1, RASSF1A, HOXA10, HOXA11 correlated with PFS

[74]

Decitabine

0.15 mg/kg i.v. daily × 5 days/wk for 2 wks

Phase I-II

Temozolomide

p.o. 75 mg/m2 daily for weeks 2–5 of a 6-week cycle

Refractory Melanoma (35 pts)

Toxicity: mainly haematological

No effect on promoters of DNA repair genes

Excellent PK and PD data (also in tumours)

[55]

Decitabine

days 1–5 q 28 days

10–20 mg/m2/day

Phase I

Ovarian, recurrent (10 pts)

Carboplatin AUC 5 day 5

Toxicity: myelosuppression, nausea, fatigue

global and gene-specific DNA methylation

[126]

Decitabine i.v. day 1

45 mg/m2

Carboplatin AUC 6 day 8

Ovarian cancer (15 pts)

Patients with methylated hMLH1 tumour DNA in plasma

Decitabine appears to reduce the efficacy of carboplatino

Decrease in global levels of methylation with Decitabine.

[127]

Decitabine

01–0.2 mg/kg 3 days weekly

Panobinostat

10-30mg q 4 days

Temozolomide 150–200 mg/m2/day

Resistant melanoma

Toxicity: myelosuppression, fatigue, nausea

No antitumour acitivity.

[128]

Entinostat

10 mg p.o. day 1 and 15 q 28 days

Randomised phase II

NSCLC (132 pts)

Erlotinib 150 mg/day

Toxicity: rash, fatigue, diarrhoea, nausea

High E-caderin levels associated with longer PFS

[86]

Entinostat

1–5 mg/kg days 1,8,15 q 28 days

Phase I

Mixed tumours (19pts)

13-cis retinoic acid 1 mg/kg

Toxicity: hyponatremia, neutropenia, anaemia.

PD: Increased histone acetylation

[129]

Entinostat

5 mg/week

Breast (64pts)

Examestane 25 mg/day

Randomised phase II. Patients had progressed with AI.

Protein lysine hyperacetylation associated with prolonged PFS

[130]

Entinostat

10 mg/2 weeks

Phase I

Mixed tumours (31 pts)

Sorafenib (400 mg tid)

Toxicity: Handfoot syndrome, nausea/vomiting, and fatigue

[131]

Hydralazine (182 mg RA; 83 mg SA)

+ Valproate (40 mg)

Phase II (17 pts)

Mixed tumours: re-treatment of resistant patients with same chemo as before

Toxicity: mainly haematological

Reduction in global DNA methylation, histone deacetylase

activity, and promoter demethylation

[58]

Hydralazine

(182 mg RA; 83 mg SA)

+ Valproate (30 mg)

Phase II

Progressive Cervical cancer (36 pts)

Cisplatin + Topotecan

Advantage in PFS (10 vs. 6 months)

Molecular correlates pending.

[59]

Hydralazine

(182 mg RA; 83 mg SA)

+ Valproate (30 mg)

Phase II

Breast (16 pts)

Doxorubicin, cyclophosphamide

Decrease in 5mC content and HDAC activity.

Up- and down-regulation of many genes.

[57]

Panobinostat

alone: 20 mg for days 1,3 and 5 for 2 weeks q 3weeks

with chemo: 15 mg

Prostate (pretreated) (16 pts)

Docetaxel 75 mg/m2 q 21 days

Toxicity: dyspnea, neutropenia

Increase in histone acetylation in PBMC

No relevant antitumour actitvity

[132]

Panobinostat

30 mg/day, days 1,3 and 5 q 14 days

Recurrent glioma (12 pts)

Bevacizumab 10 mg/kg q 14 days

Toxicity: thrombocytopenia, hypophosphatemia, hemorrhage, thrombosis.

[133]

Panobinostat

10 mg days 1,3 and 5 q 14 days

Phase I

Mixed tumours (12 pts)

Bevacizumab 10 mg/kg q 14 days

Everolimus 5 or 10 mg

Toxicity: Mucositis, arrhythmia.

No consistent change in HDAC activity in PBMC

[134]

Panobinostat

30 mg days 1 and 4

NSCLC, HNC

Erlotinib 100 mg/day

DLT: cardiac, nausea. Fatigue.

PK and PD data.

[135]

Panobinostat

20 mg

Gleevec-resistant GIST (12 pts)

No actibvity but evidence of 3HAc increase in PBMC

[136]

Panobinostat 10 mg days 1, 3 and 5

Paclitaxel, Carbopaltin AUC=5

Phase I

Miscellaneous tumours (12 pts)

Toxicity: diarrhea, fatigue, and vomiting

[137]

SAHA

100-400mg/day

RD 300 mg

GI carcinoma (14 pts)

Radiotherapy

30 Gy in 3 Gy/day over 2 weeks

Toxicity: fatigue

Diarrhoea proportional to the volume of intestine irradiated.

[41, 138]

SAHA

200–800 mg/day 1week q 2 weeks

RD 600 mg/day

Refractory colorectal

FolFOx (21 pts)

Toxicity: fatigue, anorexia, dehydration

no consistent modulation of TS expression

[88]

SAHA

days 1–3 q 14 days 600–2000 mg/day

RD 1700 mg once 600 mg tid

Phase I

Refractory colorectal (43 pts)

FU-LV

toxicity: neutropenia, thrombocytopenia, fatigue, nausea or vomiting, anorexia, mucositis.

No consistent effect on biopsies.

[139]

SAHA

400 mg/day

Tamoxifen (43 pts)

Hormone-resistant breast

Histone hyperacetylation and higher baseline HDAC2 levels that correlated with response

[84]

SAHA

RD 400 mg/day 14 days q 21 days

600 mg/day bid q 21days

Phase I (28 pts)

Mixed tumours

Paclitaxel (200 mg/m2) (Carboplatin (AUC 6)

Toxicity: emesis, neutropaenia, fatigue

[140]

SAHA

400 mg/day

Randomised Phase II

vs. placebo

NSCLC 94 pts

Paclitaxel Carboplatin

Toxicity thrombocytopenia, nausea, emesis, fatigue.

RR 34% vs. 12%

[85]

SAHA

400 mg/day

Phase I-II

resistant colorectal

5FU-leucovorin

Failed to establish an MTD

Toxicity: fatigue, thrombocytopenia and mucositis.

Intratumoral TS downregulation in one patient. Acetylation of H3 in PBMCs

[141]

SAHA

200–300 mg bid days 1–3 q 7 days

Phase I-II

Breast (54 untreated pts)

Paclitaxel 90 mg/m2/week Bevacizumab 10 mg/kg

Increased diarrhoea with the addition of SAHA

Increased acetylation of Hsp90 and α-tubulin

[66]

SAHA

400 mg/day 14 days

Phase II

Glioblastoma (37 pts)

Bortezomib 1.3 mg/m2/day days 1,4,8 and 11 q 21days

Toxicity: Fatigue.

No therapeutic advantage

[142]

SAHA

100–200 mg/day for days 1–14 q 21 days

Phase I

Mixed tumours

12 patients

Docetaxel 50–75 mg/m2 day 4 q 21 days

Excessive toxicity: neutropenic fever, cardiac, bleeding

No PK interaction

[143]

SAHA + VPA

for days 1–2 400–100 mg/day

RD 800 mg/day

Phase I (32 pts)

Mixed tumours

Doxorubicin on day 3

20 mg/m2 weekly

Toxicity: fatigue, nausea

HDAC2 expression in PBMC similar to tumours

no correlation of SAHA levels with acetylation

[144]

SAHA

300 mg/day for 16 days q 28 days

Phase I

Mixed tumours (22pts)

Marizomib

0.15-0.7 mg/m2 i.v.

days 1, 8 and 15 q 28 days

Toxicity: Fatigue, nausea, diarrhea, vomiting,

PK data. Data on proteasome inhibition in PBMC

[76]

SAHA

300 mg for days 1–3 q 8 days

Bortezomib

1.3 mg/m2 days1,8 and 15 q 21 days

NSCLC (21 pts)

Preoperative treatment.

Toxicity: fatigue and hypophosphatemia

[145]

SAHA

200–300 mg tid for days 1–4 and 8-11

Bortezomib 1–1.3 mg/m2 for day 9

Phase I (60 pts)

Comparison in PBMC and biopsies after SAHA and SAHA-Bort. Dcreased Nur77 expression.

[146]

SAHA

400 mg p.o.

for days 1–7 and 15–21 q 28 days

NSCLC (33 pts) Erlotinib-resistant

Erlotinib 150 mg/day

No clinical activity

Toxicity: anemia, fatigue and diarrhoea.

[147]

SAHA

300–400 mg/day for days 1-14

Gastric (30 pts)

Capecitabine, Cisplatin

Toxicity: thrombocytopenia, fatigue, stomatitis, anorexia

H3Ac correlated with SAHA dose

[148]

SAHA

200–400 mg p.o. for days 1–14 q 21 days

Mixed tumours (35 pts)

Sorafenib 400 mg p.o. bid

Recommended dose for SAHA 300 mg/die, but not tolerated.

Toxicity: hand-foot syndrome. No tumour response.

[149]

SAHA

tid for days 1–4 and 8–11 q 21 days

Mixed tumours (29 pts)

Bortezomib 1.3 mg/m2 i.v. for days 1, 4, 8 and 11

Toxicity thrombocytopenia, fatigue, increased ALT, elevated INR, and diarrhea.

PK data provided.

[150]

SAHA

p.o. for days 1–14

MTD 400 mg

Mixed tumours (23 pts)

Bortezomib i.v. for days 1, 4, 8 and 11 q 21 days.

MTD 1.3 mg/m2

Toxicity: fatigue, hyponatremia, nausea, anorexia

Some PK data

[151]

SAHA

300 mg daily

Mixed tumours (78 pts)

Pazopanib 600 mg daily

Toxicity: thrombocytopenia, neutropenia, fatigue, hypertension, diarrhea, vomiting

[152]

SAHA 400 mg daily

Gefitinib 250 mg

NSCLC pretreated (52 pts)

No clinical benefit

Toxicity: anorexia, diarrhea, fatigue, anemia

[153]

Valproate

30–90 mg/kg/day

for days 1–5 q 21 days

MTD 75 mg/kg/day

Karenitecin i.v. 0.8-1 mg/m2/day

for days 3–7 q 21 days

Melanoma: xenografts

Phase I-II (39 pts)

Toxicity: somnolence, fatigue

VPA levels at MTD 1.28 mMol

Histone hyperacetylation was observed in PBMC. No effect of valproate on Karenitecin PK

[154]

Valproate

15–160 mg/kg/day for days 1–3

RD 120 mg/kg/day

Phase I (44 pts)

Mostly breast

FEC day 3

Toxicity: somnolence, myelosuppression

Histone acetylation in tumour samples and in PBMCs correlated with valproic acid levels and was further linked to baseline HDAC2 but not to HDAC6 expression

[43]

Valproate

10–90 mg/kg/day

Melanoma (32 pts)

Dacarbazine 800 mg/m2 q 21 days,

interferon-α 600.000 IU twice daily

Toxicity: neurological, myelosuppression

Acetylation in PBMC measured.

“casting some doubts on the clinical use of VPA in this setting”.

[155]

Valproate

Dose escalated to obtain active plasma concentration

Mesothelioma resistant to cisplatin (45 pts)

Doxorubicin 60 mg/m2 q 21 days

Toxicity: myelosuppression

16% partial response rate

[156]

Valproate

15–160 mg/kg/day for days 1–3

MTD 140

Phase I

Mixed tumours (48pts)

Epirubicin 100 mg/m2 for day 3

Toxicity: somnolence, confusion, neutropenia

VPA levels correlate with acetylation in PBMC

Plasma VPA higher than in vitro effective concentrations

[44]

  1. References are included at the end of the text
  2. A.I. aromatase inhibitor, 5FU 5-Fluorouracil, 5mC 5-methyl Cytosine, AUC area under the curve (also a dosing calculation for Carboplatin), Bid bis in die (twice a day), DLT dose-limiting toxicity, FEC combination of Fluorouracil, Epirubicin, Cyclophosphamide, FolFOx combination chemotherapy of Folinic acid, 5-Fluorouracil and Oxaliplatin, GI gastrointestinal, GIST gastrointestinal stromal tumour, HNC head-and-neck carcinoma, i.v. intravenously, MTD maximum tolerated dose, NSCLC non-small cell lung cancer, PBMC peripheral blood mononuclear cells, PD pharmacodynamic, PFS progression-free survival, PK pharmacokinetics, p.o. per os (orally), PR partial response, Pt patient, q every (Latin “quaque”), RA rapid acetylator (Hydralazyne metabolism), RD recommended dose, RR response rate, SA slow acetylator (Hydralazyne metabolism), SAHA Vorinostat, Zolinza ®, TS Thymidylate Synthetase, target enzyme for 5FU activity, VPA Valproic Acid, WBC white blood cells