Table 3 Information of target markers
From: Diagnosis of pulmonary nodules by DNA methylation analysis in bronchoalveolar lavage fluids
Gene name | Chromosome location (hg19) | Cpg sites on TCGA datacase |
|---|---|---|
IHX9 | chr1:197889098–197889188 | cg09076431 |
GSHR | chr3:172166143–172166236 | cg07852825, cg15987088 |
CDO1 | chr5:115152460–115152575 | cg08516516, cg11036833, cg23180938 |
PTGER4-1 | chr5:40681603–40681717 |  |
PTGER4-2 | chr5:40681829–40681912 | cg27071460 |
HOXA11 | chr7:27225175–27225261 | cg15760840 |
HOXB4-1 | chr17:46655336–46655421 | cg14458834, cg21546671 |
HOXB4-2 | chr17:46655488–46655610 | cg08089301, cg09194159, cg14345497 |
HOXB4-3 | chr17:46655771–46655862 | cg02422694, cg07015911, cg12806763, cg19081437, cg24114154, cg26327071 |
HOXB4-4 | chr17:46655935–46656053 | cg21460081 |
MIR196A1 | chr17:46711296–46711411 | cg01452847 |