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Table 5 Human canonical and non-canonical linker histones of the H1 family with their chromosomal location, expression and function

From: The dark side of histones: genomic organization and role of oncohistones in cancer

 

Gene name*

Histone protein codified

Gene chromosomal location

Expression

Function

References

 

Canonical H1 linker histones

1

HIST1H1A

H1.1

6p22.2 (in histone cluster 1)

Replication-dependent

Linker histone essential for the condensation of nucleosome chains into higher-order structured fibers

[18, 44]

2

HIST1H1C

H1.2

6p22.2 (in histone cluster 1)

Replication-dependent

Linker histone essential for the condensation of nucleosome chains into higher-order structured fibers

[18, 44]

3

HIST1H1D

H1.3

6p22.2 (in histone cluster 1)

Replication-dependent

Linker histone essential for the condensation of nucleosome chains into higher-order structured fibers

[18, 44]

4

HIST1H1E

H1.4

6p22.2 (in histone cluster 1)

Replication-dependent

Linker histone essential for the condensation of nucleosome chains into higher-order structured fibers

[18, 44]

5

HIST1H1B

H1.5

6p22.1 (in histone cluster 1)

Replication-dependent

Linker histone essential for the condensation of nucleosome chains into higher-order structured fibers

[18, 44]

6

HIST1H1T (or H1-6)

H1t (or H1.6)§

6p22.2 (in histone cluster 1)

Replication-dependent and tissue-specific (testis-specific)

Formation of more relaxed chromatin

[45]

Non-canonical linker histone H1

1

H1FNT (or H1-7)

H1t2 (or H1.7)

12q13.11

Replication-independent and tissue-specific (testis-specific)

Required for spermatid elongation and DNA condensation during spermiogenesis (essential for normal spermatogenesis and male fertility)

[46]

2

H1FOO (or H1-8)

H1oo (or H1.8)

3q22.1

Replication-independent and tissue-specific (oocyte-specific)

Regulation of gene expression during oogenesis and early embryogenesis

[47]

3

HILS1 (or H1-9)

H1.9

17q21.33

Replication-independent and tissue-specific (testis-specific)

Involvement in chromatin remodeling during mammalian spermiogenesis

[48]

4

H1FX (or H1-10)

H1x (or H1.10)

3q21.3

Replication-independent

Required for mitotic progression

[49]

5

H1-0

H1.0

22q13.1

Replication-independent

Required for the terminal stages of differentiation

[50, 51]

  1. *The gene names of canonical histones are composed by a first part referring to their histone cluster, followed by the type of histone and, finally, by a letter, designated in alphabetical order for each histone type, based on the distance from the telomere
  2. §These isoforms are testis-specific variants