Table 1 Colocalization of smoking related eQTMs with eQTLs
CpG | Genes | Colocalization Locus | eQTM-T (directionality) | Number of SNPs* | Probability of colocalization |
|---|---|---|---|---|---|
cg23813257 | IL32 | 16p13.3 | − 9.82 | 66 | 1.00 |
cg02532700 | PVALB | 22q13.1 | − 12.20 | 67 | 1.00 |
cg25174412 | C12orf75 | 12q23.3 | 5.90 | 30 | 1.00 |
cg07027613 | RBP5 | 12p13.31 | 7.09 | 117 | 1.00 |
cg12619504 | MGAT4B | 5q35 | − 5.91 | 140 | 1.00 |
cg14656441 | NDUFS5 | 1p34.2-p33 | 6.86 | 273 | 1.00 |
cg01360605 | LOC284757 | 20q13.33 | − 7.25 | 108 | 1.00 |
cg09099830 | ITGAL | 16p11.2 | − 6.33 | 53 | 1.00 |
cg13935577 | BTBD11 | 12q23.3 | 7.35 | 235 | 0.99 |
cg26105649 | NTPCR | 1q42.2 | − 17.18 | 484 | 0.99 |
cg13834112 | ANPEP | 15q25-q26 | 7.81 | 52 | 0.99 |
cg26403843 | RNF145 | 5q33.3 | − 6.04 | 81 | 0.98 |
cg26724967 | IL32 | 16p13.3 | − 17.33 | 102 | 0.98 |
cg16526047 | ISG15 | 1p36.33 | − 7.05 | 41 | 0.98 |
cg16649298 | WDR60 | 7q36.3 | 6.23 | 198 | 0.97 |
cg13707943 | FAM102A | 9q34.11 | − 7.39 | 214 | 0.97 |
cg04521626 | PLD2 | 17p13.1 | 6.73 | 102 | 0.97 |
cg16608652 | B3GALT2 | 1q31 | − 7.50 | 2 | 0.97 |
cg14018141 | CD300A | 17q25.1 | 6.98 | 27 | 0.95 |
cg21913886 | TMEM51 | 1p36.21 | − 5.85 | 293 | 0.92 |
cg06478823 | ACSM3|ERI2 | 16p13.11 | − 5.79 | 416 | 0.92 |
cg11465630 | C21orf33 | 21q22.3 | − 7.89 | 277 | 0.88 |