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Table 1 Number of methylated and unmethylated cytosines in different cytosine contexts in all individuals analyzed

From: Genome-wide analysis of DNA methylation in Hirschsprung enteric precursor cells: unraveling the epigenetic landscape of enteric nervous system development

 

C´s in CpG

C´s in CHG

C´s in CHH

Methylated

Unmethylated

Methyl-Percentage

Methylated

Unmethylated

Methyl-Percentage

Methylated

Unmethylated

Methyl-Percentage

Control 1

30,050,265

12,167,840

71.18

1,875,285

179,873,431

1.03

4,413,390

551,578,346

0.79

Control 2

42,090,795

15,969,095

72.5

2,427,147

243,349,625

0.99

4,814,247

736,235,146

0.65

Control 3

29,493,831

10,880,970

73.05

1,942,648

167,719,335

1.15

3,745,346

498,358,157

0.75

HSCR 1

26,349,464

13,484,402

66.15

1,747,722

165,419,793

1.05

3,449,030

494,957,852

0.69

HSCR 2

25,597,701

11,573,819

68.86

1,571,162

158,245,790

0.98

3,528,819

489,494,356

0.72

HSCR 3

34,443,644

16,189,793

68.03

2,056,259

205,334,287

0.99

4,515,296

613,140,567

0.73

HSCR 4

31,488,581

13,139,219

70.56

1,946,809

178,421,845

1.08

4,014,891

523,242,181

0.76

HSCR 5

26,623,246

17,308,814

60.6

1,922,228

175,652,489

1.08

4,181,687

519,142,086

0.8