GMD
|
Positive correlations
|
Negative correlations
|
---|
GMDs correlated with ≥ 5 individual probes
|
SETDB1
|
422
|
1
|
CBX2
|
383
|
0
|
KDM2B
|
352
|
1
|
TET3
|
280
|
0
|
DNMT3A
|
43
|
0
|
MGMT
|
39
|
0
|
TDG
|
20
|
0
|
DNMT1
|
11
|
0
|
EHMT2
|
10
|
0
|
TET1
|
9
|
0
|
DNMT3B
|
6
|
0
|
EZH2
|
5
|
0
|
IDH2
|
5
|
0
|
MBD1
|
4
|
1
|
ZBTB38
|
0
|
86
|
APOBEC3G
|
0
|
63
|
APOBEC3C
|
2
|
24
|
GMDs correlated with ≥ 4 gene regions
|
SETDB1
|
54
|
0
|
KDM2B
|
53
|
0
|
TET3
|
41
|
0
|
CBX2
|
39
|
0
|
DNMT3A
|
9
|
0
|
DNMT1
|
7
|
0
|
APOBEC3G
|
0
|
12
|
ZBTB38
|
0
|
4
|
APOBEC3C
|
0
|
4
|
- Listed are the counts of correlations satisfying p < 1.389 × 10–8 and Spearman |ρ| > 0.5 for individual probes and pFDR < 0.05 and Spearman |ρ| > 0.5 for gene regions