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Table 2 Canonical pathways among total AGM DMG

From: DNA methylation changes in metabolic and immune-regulatory pathways in blood and lymph node CD4 + T cells in response to SIV infections

Ingenuity canonical pathways

 − log(p value)

Genes

Neuregulin signaling

3.34

RPS6KB1, ITGA3, HSP90AB1, GRB2, CRKL, PRKCB, EGFR, PRKCA

Nitric oxide signaling in the cardiovascular system

3.33

PDE2A, HSP90AB1, GUCY1A3, GRB2, PRKAR1B, PIK3CD, ARG2, PRKCB, PRKCA

Caveolar-mediated endocytosis signaling

3.14

ITGA3, ITGA7, ACTC1, ITGB7, COPG1, EGFR, PRKCA

Cholecystokinin/gastrin-mediated signaling

2.88

PTK2, GRB2, CREM, PLCB1, IL1F10, PRKCB, EGFR, PRKCA

3-phosphoinositide biosynthesis

2.64

PLPP6, ITPK1, TNS3, PTPRJ, PPP1R7, GRB2, DOT1L, PIK3CD, MTMR7, EGFR, SACM1L

HER-2 signaling in breast cancer

2.59

GRB2, PIK3CD, PARD3, ITGB7, PRKCB, EGFR, PRKCA

Gap junction signaling

2.59

DBN1, GUCY1A3, GRB2, PRKAR1B, PLCB1, PIK3CD, ACTC1, PRKCB, EGFR, PRKCA

UVB-induced MAPK signaling

2.58

RPS6KB1, GRB2, PIK3CD, PRKCB, EGFR, PRKCA

HGF signaling

2.54

ETS1, PTK2, ITGA3, GRB2, CRKL, PIK3CD, PRKCB, PRKCA

Superpathway of inositol phosphate compounds

2.53

PLPP6, ITPK1, TNS3, PTPRJ, PPP1R7, GRB2, DOT1L, PLCB1, PIK3CD, MTMR7, EGFR, SACM1L

  1. Top 10 pathways sorted by statistical significance are depicted