Table 2 Differentially methylated genes. Gene regions with > 20 percent points difference in methylation ratio, between least methylated sample to most methylated sample along with fold change differences are listed. Hyper-methylated target region of those genes are shown in bold

GAS7

chr17: 10199716 - 10200316

0.2670

0.9332

0.6662

3.4951

ELAC2

chr17: 13019069 - 13019845

0.4581

0.8332

0.3751

1.8188

GSTM1

chr1: 109686327 - 109687046

0.6438

1.0000

0.3562

1.5533

THBS1

chr15: 39579298 - 39579871

0.4671

0.7885

0.3214

1.6881

CIITA

chr16: 10874982 - 10875928

0.2511

0.5577

0.3066

2.221

RASSF1

chr3: 50339388 - 50340021

0.1786

0.4720

0.2934

2.6428

CHN1

chr2: 174846842 - 174848034

0.2141

0.5074

0.2933

2.3699

MSH2

chr2: 47401613 - 47402319

0.5897

0.8734

0.2838

1.4811

PALB2

chr16: 23642511 - 23643136

0.6333

0.9134

0.2801

1.4423

RUNX3

chr1: 24964233 - 24965550

0.3920

0.6479

0.2559

1.6528

TP63

chr3: 189789769 - 189790448

0.6612

0.9059

0.2446

1.3701

PDCD1LG2

chr9: 5510022 - 5511326

0.3182

0.5511

0.2330

1.7319

AIP

chr11: 67481632 - 67482276

0.6716

0.9002

0.2286

1.3404

GPC3

chrX: 133986729 - 133987434

0.5842

0.8036

0.2194

1.3756

AIP

chr11: 67482202 - 67482880

0.1035

0.3214

0.2180

3.1053

GSTP1

chr11: 67581895 - 67582976

0.2673

0.4834

0.2162

1.8085

AIP

chr11: 67481257 - 67481869

0.7857

1.0000

0.2143

1.2728

XPA

chr9: 97698585 - 97699193

0.6991

0.9130

0.2139

1.306

APC

chr5: 112736082 - 112736959

0.6361

0.8479

0.2118

1.333

CTCFL

chr20: 57524096 - 57527440

0.6554

0.8663

0.2109

1.3218

CASP8

chr2: 201259179 - 201260169

0.3698

0.5799

0.2102

1.5681

ZNF668

chr16: 31064314 - 31065859

0.4513

0.6584

0.2070

1.4589

--

--

--

--

--

--

RABEP1

chr17: 5281240 - 5283045

0.0415

0.1033

0.0618

2.4902

AIP

chr11: 67482382 - 67483805

0.0517

0.1229

0.0712

2.3783

RASSF1

chr3: 50338258 - 50339618

0.0976

0.2178

0.1202

2.2322

FOXO4

chrX: 71094692 - 71096928

0.1256

0.2592

0.1335

2.0629

ZRSR2

chrX: 15789350 - 15791219

0.0559

0.1021

0.0462

1.8252

RUNX1T1

chr8: 92102449 - 92105016

0.0558

0.1008

0.0450

1.8068

RHOH

chr4: 40196452 - 40197679

0.1059

0.1914

0.0855

1.8067