|
SNP
|
RefGene
|
Position (hg19)
|
ncRNA
|
Host gene
|
Bonferroni-adj. p value
|
% ncRNA mRNA levels difference
|
|---|
|
rs7117514
|
SHANK2
|
11:70544937
|
hsa-miR-3664-5p
|
SHANK2
|
0.015
|
5.2
|
|
rs72710803
|
AL122019
|
1:177428018
|
hsa-miR-488-5p
|
ASTN1
|
0.026
|
10
|
|
rs301799
|
RERE
|
1:8489302
|
hsa-miR-6728-3p
|
ENO1
|
0.032
|
− 8.9
|
|
rs7659414
|
–
|
4:177350956
|
ENSG00000201516
|
WDR17
|
0.037
|
− 3.9
|
- Linear models with ncRNA expression as outcome and SNP, age, and sex as predictors. The difference in mRNA levels is shown between major allele carriers and heterozygous and homozygous for minor allele
- SNP single nucleotide polymorphism, ncRNA non-coding RNA
