|
meQTL SNP
|
Chromosome
|
Associated gene
|
No. of paired CpGs*
|
|---|
|
rs301799
|
1
|
RERE
|
2
|
|
rs1890946
|
1
|
NRDC
|
1
|
|
rs72710803
|
1
|
AL122019
|
2
|
|
rs7585722
|
2
|
RNF103-CHMP3
|
2
|
|
rs4346585
|
3
|
SOCS5P3, ZKSCAN7-AS1
|
3
|
|
rs13084037
|
3
|
KLHDC8B
|
2
|
|
rs7624336
|
3
|
TKT
|
1
|
|
rs6783233
|
3
|
LOC101926953
|
1
|
|
rs7685686
|
4
|
HTT
|
5
|
|
rs34937911
|
4
|
SLC30A9
|
1
|
|
rs60157091
|
5
|
KIF2A
|
1
|
|
rs200949
|
6
|
HIST1H1B
|
7
|
|
rs7758630
|
6
|
LOC107984041
|
1
|
|
rs1933802
|
6
|
HACE1--[]--LIN28B
|
2
|
|
rs3823624
|
7
|
MAD1L1
|
9
|
|
rs2043539
|
7
|
TMEM106B
|
2
|
|
rs7030813
|
9
|
PAX5
|
1
|
|
rs2670139
|
9
|
DENND1A
|
1
|
|
rs198457
|
11
|
-
|
4
|
|
rs7117514
|
11
|
SHANK2
|
1
|
|
rs3213572
|
12
|
SPPL3
|
1
|
|
rs1343605
|
13
|
OLFM4--[]
|
1
|
|
rs4772087
|
13
|
STK24
|
1
|
|
rs1045430
|
14
|
AREL1
|
1
|
|
rs62091461
|
18
|
RAB27B
|
1
|
|
rs7241572
|
18
|
KCNG2
|
6
|
|
rs12624433
|
20
|
SLC12A5
|
1
|
|
rs5995992
|
22
|
RBX1---[]-EP300
|
3
|
- *Validation analysis was run by applying lm models between the methylation level and genetic dominant model, adjusting for age and sex The Benjamini-Hochberg multiple-testing adjustment was applied to the p values. A CpG site was paired with the meQTL SNP if the adjusted p value < 0.05
- meQTL methylation quantitative trait locus, SNP single nucleotide polymorphism
