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Table 2 DM genes for cytokine/chemokines and their receptor in early RA

From: Differential CpG DNA methylation in peripheral naïve CD4+ T-cells in early rheumatoid arthritis patients

Gene SymbolNaive cellsMemory cellsMonocytes
Interleukin family
ClusterIL6, IL12A, IL13, IL21, IL25, IL31, IL34, IL36G,
IL1RAPL2, IL5RA, IL6R, IL10RA, IL12RB1, IL15RA, IL17RC, IL17RE, IL17REL, IL27RA
IL1B, IL6, IL12A, IL15, IL17F, IL17D, IL24, IL37,
IL1R2, IL4R, IL6R, IL12RB1, IL15RA, IL17RB, IL17RC, IL17RD, IL17REL, IL20RB, IL21RAS1
IL16, IL37,
IL1RN IL17RC
Isolated CpGIL1B, IL5, IL10, IL15, IL16, IL17C, IL17D, IL19, IL25, IL36B,
IL17RA, IL18RAP, IL18BP, IL1R1, IL1R2, IL1RN, IL2RA, IL2RB
IL17RAIL12
Tumour necrosis growth factor family
ClusterTNF, TNFAIP8, TNFSF10, TNFSF12, TNFSF14,
TNFRSF1A, TNFRSF1B, TNFRSF6, TNFRSF8, TNFRSF10B, TNFRSF13B,
TNFRSF10C, TNFAIP8, TNFAIP8L3,TNFAIP8L1,
TNFRSF9, TNFRSF10B, TNFRSF18, TNFRSF19, TNFRSF25
TNFAIP2, TNFAIP3,
TNFRSF18, TNFRSF19, TNFRSF25
Isolated CpGTNFSF4, TNFSF10, TNFSF12,
TNFRSF10A
TNFRSF13B, TNFRSF13CTNFRSF1B
Interferon family
ClusterIFNA2,
IFNGR2
IFNGR2, IFNGR1 
Isolated CpGIFNL4  
Transforming growth factor family
ClusterTGFBR1, TGFBR2, TGFBR3TGFB3 TGFB1,
TGFBR2, TGFBR3,
TGFB1, TGFB2AS1
Isolated CpGTGFA, TGFB2-AS1TGFBR3LTGFA
Chemokine families
ClusterCCL5, CCL16, CCL25, CCL27, CXCL12
CCR3, CCR5, CCR7, CCR9,CCRL2, CXCR4
CXCL2,CXCL5CCL24, CXCL3, CXCL12, CCR3, CCR9
Isolated CpGCCL2, CCL8, CCL20, CCL24, CXCL11
CXCR1, CXCR5
CCL23, CCL25, CCL28, CXCL1, CXCL3, CXCL11, CXCL14, CXCL12, CXCL16, CCR3, CCR6, CCR9, CCR10, CCRL2, CXCR1, CXCR2, CXCR4CCL3, CXCL1, CXCL16, CCR7, CXCR1, CXCR4