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Table 2 The 20 most differentially methylated positions (DMPs) associated with the emergence of dimensional psychopathology

From: Detecting multiple differentially methylated CpG sites and regions related to dimensional psychopathology in youths

CpG ID β fold change Adjusted p value Chromosome Position (bp) Gene annotation
cg11166600 0.1002 0.0037 chr3 143,695,141 C3orf58 (body)
cg15427886 0.0896 0.0039 chr8 55,379,663 –
cg14116799 − 0.0764 0.0092 chr10 43,800,154 –
cg03213396 0.0699 0.0107 chr19 53,760,449 VN1R2 (TSS1500)
cg25024195 0.0925 0.0253 chr17 46,144,968 –
cg03638479 − 0.0667 0.0253 chr3 52,009,768 ABHD14B (TSS1500);
ABHD14A (body)
cg14525247 0.0630 0.0253 chr9 131,154,899 MIR219–2 (body)
cg25275750 0.0562 0.0410 chr13 75,918,697 TBC1D4 (body)
cg10544031 − 0.0261 0.0410 chr2 223,164,635 PAX3 (TSS1500, 5′UTR);
CCDC140 (TSS1500)
cg22871870 0.0525 0.0415 chr15 77,348,431 TSPAN3 (body)
cg20664238 0.0193 0.0415 chr15 88,798,877 NTRK3 (body)
cg05673214 0.0498 0.0415 chr16 743,476 FBXL16 (3′UTR)
cg01215511 0.0681 0.0414 chr16 2,975,552 FLYWCH1 (5′UTR)
cg09288320 0.0770 0.0415 chr2 210,994,670 C2orf67 (Body)
cg00137855 0.0612 0.0415 chr5 74,163,723 FAM169A (TSS1500)
cg19377326 0.0657 0.0416 chr1 31,486,063 PUM1 (Body)
cg03729042 0.0444 0.0416 chr1 183,560,923 NCF2 (TSS1500)
cg00589617 0.0647 0.0416 chr1 230,415,343 GALNT2 (3’UTR)
cg24250902 0.0682 0.0416 chr1 230,415,547 GALNT2 (3’UTR)
cg03754250 − 0.0394 0.0416 chr10 31,320,338 ZNF438 (5’UTR, Body)
  1. Wave 0 was used as the reference. Annotation was performed according to hg19, and the probe location and gene annotation were taken from Illumina reference files. CpG ID unique identifier from the Illumina CG database. Adjusted p value: false discovery rate (FDR) procedure using the Benjamini–Hochberg method (FDR < 0.05). TSS1500 200–1500 bases upstream of the transcriptional start site (TSS)
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Clinical Epigenetics

ISSN: 1868-7083

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