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Fig. 3 | Clinical Epigenetics

Fig. 3

From: DNA methylation of individual repetitive elements in hepatitis C virus infection-induced hepatocellular carcinoma

Fig. 3

Directional consistency of the effect sizes of dmREs in HCV-HCC. a UFSH vs. TCGA. HCV-HCC REs were directionally consistent between UFSH and TCGA data, regardless of the significant levels in TCGA. b HCV-HCC (UFSH) vs. HCV-cirrhosis (UFSH). Note that among these dmREs in HCV-HCC, no RE had FDR < 0.001 in HCV-cirrhosis. However, the six (orange marks) REs that showed directional consistency were also the most significant (FDR < 0.1)

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