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Fig. 5 | Clinical Epigenetics

Fig. 5

From: Systematic evaluation and validation of reference and library selection methods for deconvolution of cord blood DNA methylation data

Fig. 5

Comparison of estimated cell types and matched FACS cell counts. Scatter plots of deconvolution estimates using CP/QP programming and matched FACS cell counts in an individual birth cohort (Generation R, n = 191) using cleaned IDOL and pickCompProbes libraries and the combined UCB reference. Smoothing lines represent the linear model. R2 and RMSE using the two methods are indicated for each cell type

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