| CpG | Chr | Position in bp (hg19a) | Association with SPY (EWAS samples) | Association with smoking status (EWAS samples) | Association with OSCC | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Δβ/10 SPY | p nom | q | Δβ | p nom | q | Δβ | p nom | p adj | ||||
CYP1B1 | cg01584760b | 2 | 38,296,474 | − 0.046 | 3.8 × 10−10 | 3.1 × 10−4 | − 0.045 | 1.0 × 10−4 | 0.853 | Not analysed | ||
cg02162897 | 2 | 38,300,537 | − 0.11 | 1.2 × 10−7 | 0.014 | − 0.183 | 5.5 × 10−8 | 0.022 | 0.197 | 4.7 × 10−6 | 6.1 × 10−4 | |
cg20408276 | 2 | 38,300,586 | − 0.108 | 1.1 × 10−7 | 0.014 | − 0.176 | 3.6 × 10−7 | 0.04 | Not analysed | |||
cg00565882 | 2 | 38,300,707 | − 0.041 | 1.7 × 10−6 | 0.042 | − 0.044 | 0.005 | 1 | 0.16 | 8.6 × 10−7 | 1.1 × 10−4 | |
cg01410359 | 2 | 38,302,230 | − 0.037 | 3.4 × 10−6 | 0.047 | − 0.032 | 0.023 | 1 | 0.177 | 8.8 × 10−7 | 1.1 × 10−4 | |
AHRR | cg04551776 | 5 | 393,366 | − 0.007 | 4.3 × 10−1 | 0.97 | − 0.011 | 0.43 | 1 | 0.149 | 2.7 × 10−5 | 3.5 × 10−3 |
cg06036945 | 5 | 394,869 | − 0.067 | 1.0 × 10−4 | 0.18 | − 0.125 | 3.7 × 10−7 | 0.04 | Not analysed | |||
cg04066994c | 5 | 394,891 | − 0.041 | 8.2 × 10−6 | 0.067 | − 0.083 | 5.9 × 10−10 | 4.7 × 10−4 | Not analysed | |||
cg25648203 | 5 | 395,444 | − 0.007 | 0.42 | 0.99 | − 0.012 | 0.37 | 1 | − 0.081 | 9.7 × 10−3 | 1 |