Table 5 Summary of altered CGIs in the different cancer types
From: Clustered protocadherins methylation alterations in cancer
UCSC CGI | Relation to UCSC CGI | Methylation Analyses | |||||||
|---|---|---|---|---|---|---|---|---|---|
CRA | CRC | GC | BTC | PA | CLL | ||||
Intrahepatic chol | Extrahepatic chol | Gallbladder cancer | |||||||
chr5:140750050-140750264 | Island | Hypermethylation | NA | NA | NA | NA | NA | ND | NA |
chr5:140762401-140762768 | Island | NA | NA | Hypermethylation | ND | ND | ND | ND | NA |
chr5:140787447-140788044 | Island | NA | NA | Hypermethylation | NA | Hypermethylation | Hypermethylation | ND | NA |
chr5:140855386-140856620 | Island | NA | Hypermethylation | Hypermethylation | NA | NA | NA | NA | NA |
chr5:140857864-140858065 | Island | Hypermethylation | Hypermethylation | NA | NA | NA | NA | ND | NA |
chr5:140864527-140864748 | Island | Hypermethylation | Hypermethylation | Hypermethylation | NA | NA | NA | NA | NA |
chr5:140871064-140872335 | N-shelf | NA | NA | NA | NA | NA | NA | Hypomethylation | NA |
chr5:140892914-140893189 | Island | Hypermethylation | Hypermethylation | NA | NA | NA | NA | ND | NA |