Table 3 Number of significant DMRs and overlaps between them. The number of overlapped CpGs within each DMR is shown in parenthesis
EWAS | Case-control comparison | Case-case comparison | |||||||
|---|---|---|---|---|---|---|---|---|---|
CLO | CPO | CLP | CLP+CLO | CLP+CPO | All case | CLO vs CPO | CLP vs CLO | CLP vs CPO | |
CLO | 10 (75) | 1 (14) | 1 (14) | 4 (28) | 1 (14) | 3 (22) | 0 (0) | 2 (21) | 0 (0) |
CPO | Â | 6 (33) | 1 (14) | 1 (14) | 3 (19) | 3 (19) | 2 (7) | 0 (0) | 1 (2) |
CLP | Â | Â | 41 (275) | 8 (67) | 9 (73) | 9 (76) | 0 (0) | 2 (10) | 0 (0) |
CLP+CLO | Â | Â | Â | 26 (184) | 9 (83) | 19 (134) | 0 (0) | 0 (0) | 1 (4) |
CLP+CPO | Â | Â | Â | Â | 31 (198) | 17 (118) | 0 (0) | 2 (10) | 0 (0) |
All case | Â | Â | Â | Â | Â | 37 (222) | 0 (0) | 0 (0) | 0 (0) |
CLO vs CPO | Â | Â | Â | Â | Â | Â | 10 (45) | 0 (0) | 4 (21) |
CLP vs CLO | Â | Â | Â | Â | Â | Â | Â | 9 (108) | 0 (0) |
CLP vs CPO | Â | Â | Â | Â | Â | Â | Â | Â | 13 (64) |