Improved filtering of DNA methylation microarray data by detection p values and its impact on downstream analyses

Clinical Epigenetics

Table 1 Overview of 450K Gene Expression Omnibus datasets used in the current study

GEO Accession	Tissue	Male (n)	Female (n)
GSE60655	Vastus lateralis muscle	16	20
GSE61496	Whole blood	154	141
GSE63106	Cartilage from knees and hip joints	24	38
GSE65163	Nasal epithelial cells	35	36
GSE69502	Fetal tissues: muscle, kidney, spinal cord, brain, chorionic villi	89	81
GSE74432	Whole blood	57	62
GSE75196	Placenta	11	13
GSE75248	Placenta	155	162
GSE85042	Cord blood	32	39
GSE85566	Airway epithelial cells	36	78
GSE86961	Papillary thyroid tumor tissue, non-neoplastic adjacent tissue	21	60
GSE87571	Whole blood	341	389
GSE89251	CD4+ T cells	38	98
GSE90871	Developing dorsolateral prefrontal cortex	13	11
GSE97362	Whole blood	145	83
GSE99863	Whole blood	126	117
GSE102177	Whole blood	20	14

ISSN: 1868-7083