Table 3 Differentially methylated regions
Contrast | Gene | FDR | Number of probes | Chr | Start (bp)a | End (bp)a | Transcription factorsb |
|---|---|---|---|---|---|---|---|
M10h vs M0 | EPHB1 | 1.60E−11 | 3 | 3 | 134,515,421 | 134,516,302 | – |
CDCA7L | 3.83E−07 | 5 | 7 | 21,985,276 | 21,985,628 | Nr1h3 | |
CLVS2 | 8.21E−07 | 10 | 6 | 123,317,123 | 123,317,875 | Nrsf | |
BACE2, MIR3197 | 1.38E−06 | 3 | 21 | 42,539,960 | 42,540,409 | CTCF | |
EXPH5 | 5.76E−06 | 6 | 11 | 108,464,101 | 108,464,498 | Cmyc; Egr1; FOXA1; MYC; Max; SP1; | |
KCNE4 | 1.50E−05 | 3 | 2 | 223,916,686 | 223,916,861 | USF1 | |
TTC38 | 1.50E−05 | 4 | 22 | 46,685,471 | 46,685,728 | NA | |
TTC39A | 1.51E−05 | 5 | 1 | 51,810,626 | 51,811,022 | – | |
NA | 2.17E−05 | 3 | 4 | 153,897,215 | 153,897,453 | NA | |
NA | 2.33E−05 | 3 | 10 | 132,891,318 | 132,891,371 | NA | |
M7d vs M0 | SFRP2 | 1.18E−11 | 28 | 4 | 132,891,371 | 154,711,183 | CTCF; Egr1 |
GPR19 | 4.59E−10 | 11 | 12 | 12,848,515 | 12,849,588 | E2F4; ZBTB33; | |
TMEM216 | 3.46E−07 | 7 | 11 | 61,159,601 | 61,159,837 | CTCF; Egr1; Gabp; Yy1 |