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Table 1 Amplicons utilised in the study

From: Prediction of smoking by multiplex bisulfite PCR with long amplicons considering allele-specific effects on DNA methylation

Reference (index) CpG, Illumina ID The closest gene to the reference CpG Genome coordinate (hg19) of the amplicon DNA strand of the amplicon Length of the amplicon, bp Amount of CpGs in the amplicon Reference
cg05575921 AHRR chr5:372478-373819 + 1342 44 [28, 29, 63,64,65,66,67,68,69,70]
cg21566642 ALPPL2 chr2:233283630-233284930 1301 114 [28, 29, 63,64,65,66, 68, 70]
cg06126421 IER3 chr6:30719327-30720645 + 1319 19 [28, 29, 65, 66, 68, 70]
cg25189904 GNG12 chr1:68298855-68300158 1304 85 [28, 29, 64, 68, 69]
cg09935388 GFI1 chr1:92947265-92948622 + 1358 73 [28, 29, 67, 68, 70]
cg15417641 CACNA1D chr3:53699512-53700811 1300 17 [28, 29, 68]