Skip to main content

Table 2 Specific genomic information of CpG sites shown to be associated with the rs174570

From: FADS1-FADS2 genetic polymorphisms are associated with fatty acid metabolism through changes in DNA methylation and gene expression

Region

CpG site

Location

Sequence

Region1

CpG_9

Chr11: 61814879

GAAAGACCCGCAAGAAGGGA [CG]GAAGTCTCATAGCCCTGAGA

CpG_10

Chr11: 61814891

AAGGGACTTATTGAAAGACC [CG]CAAGAAGGGACGGAAGTCTC

CpG_11

Chr11: 61814944

CGTAGGGAAGTCTTCCTCTT [CG]TGGTTTTTGGAGAACCCTAG

CpG_12

Chr11: 61814968

AACGCAGAAGTGCCCCAGTT [CG]GACGTAGGGAAGTCTTCCTC

Region2

CpG_1

Chr11: 61820815

CTTTGCCTCCTGGGTTCAAG [CG]ATTCTCCTGCCTCACCCCCA

Region3

CpG_2

Chr11: 61825572

AGGTTGCAGTGAGCTGAGAT [CG]CACCACTGCACTCCAGCCTG

CpG_3

Chr11: 61825596

CCACTGCACTCCAGCCTGGG [CG]ACAGAGTGAGACCCTGTCTC

CpG_4

Chr11: 61825658

GAAAAAGCCCTTTGGGAGGC [CG]AGGCAGGTGGATCACGAGGT

  1. Region1, region2, and region3 indicate the selected regions used for DNA methylation analysis; sequence indicates 20 bp upstream and downstream of the CpG site in the genome (GRCh38/hg38 Assembly). Chr chromosome