Gene, chromosome and RefSeq ID | RefSeq ID coordinate | Overall mean meth % | Overall mean meth % | Overall meth difference | P value | Q value | Age-adjusted |
---|---|---|---|---|---|---|---|
(CpG site) | ± SD (AAA n = 24) | ± SD (controls n = 20) | (% ± SE) | odds ratio | |||
ERG | 5389 | 19.00 (3.48) | 14.83 (4.42) | 4.17 (1.23) | 0.0019 | 0.0037 | NS |
Chr: 21 | 5393 | 19.43 (3.72) | 14.83 (3.618) | 4.60 (1.16) | 0.0004 | 0.0010 | NS |
NG_029732.1 | 5400 | 21.26 (5.76) | 16.50 (10.57) | 4.76 (2.58) | 0.0002 | 0.0010 | 6.70 |
5402 | 20.43 (5.45) | 14.83 (3.50) | 5.60 (1.48) | 0.0001 | 0.0009 | NS | |
5405 | 19.96 (4.15) | 14.89 (3.43) | 5.07 (1.21) | 0.0001 | 0.0008 | 6.18 | |
5408 | 20.13 (4.20) | 14.89 (3.51) | 5.24 (1.23) | 0.0001 | 0.0008 | 6.19 | |
5429 | 24.13 (5.26) | 18.56 ((3.22) | 5.58 (1.41) | 0.0003 | 0.0010 | NS | |
5440 | 24.65 (4.49) | 19.50 (3.40) | 5.15 (1.28) | 0.0001 | 0.0008 | NS | |
5442 | 24.57 (5.12) | 19.28 (3.25) | 5.29 (1.38) | 0.0002 | 0.0009 | NS | |
5458 | 27.22 (4.88) | 22.22 (3.15) | 5.00 (1.33) | 0.0003 | 0.0010 | NS | |
5468 | 28.35 (6.01) | 22.67 (3.16) | 5.68 (1.56) | 0.0015 | 0.0032 | NS | |
5474 | 29.39 (5.55) | 24.39 (3.48) | 5.00 (1.50) | 0.0012 | 0.0027 | NS | |
5507 | 30.83 (5.57) | 25.33 (3.09) | 5.49 (1.46) | 0.0004 | 0.0010 | NS | |
IL6R Chr: 1 | 3570 | 93.17 (5.62) | 76.70 (23.02) | 16.47 (4.85) | 0.0113 | 0.0743 | 3.11 |
NG_012087.1 | 3676 | 84.92 (10.89) | 73.00 (17.49) | 11.92 (4.31) | 0.0176 | 0.0773 | NS |
SERPINB9 | 2889674 | 51.00 (16.19) | 64.47 (16.19) | −13.47 (4.97) | 0.0063 | 0.0375 | NS |
Chr: 6 | 2889644 | 20.46 (20.29) | 8.579 (10.64) | 11.88 (5.14) | 0.0098 | 0.0478 | 3.29 |
NC_000006.12 | 2889627 | 71.67 (18.37) | 82.53 (14.94) | −10.86 (5.20) | 0.0058 | 0.0375 | NS |
2889620 | 62.88 (19.54) | 79.11 (15.15) | −16.23 (5.47) | 0.0017 | 0.0273 | NS | |
2889612 | 70.33 (19.08) | 80.37 (17.96) | −10.04 (5.71) | 0.0064 | 0.0375 | NS | |
2889568 | 76.58 (19.21) | 87.21 (11.26) | −10.63 (4.97) | 0.0012 | 0.0273 | 0.33 | |
2889564 | 78.67 16.34) | 88.58 (10.65) | −9.91 (4.35) | 0.0010 | 0.0273 | NS | |
SMYD2 | 214280412 | 39.50 (14.74) | 55.67 (16.24) | −16.17 (6.00) | 0.0004 | 0.0200 | NS |
Chr: 1 | 214280441 | 32.91 (10.53) | 44.80 (17.29) | −11.89 (4.87) | 0.0014 | 0.0299 | 0.09 |
NC_000001.11 | 214280507 | 38.78 (12.67) | 49.22 (7.93) | −10.44 (4.56) | 0.0016 | 0.0299 | 0.06 |
214280600 | 37.04 (11.02) | 45.30 (11.43) | −8.26 (4.22) | 0.0014 | 0.0299 | 0.03 |