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Table 2 The top-ranked DMPs (ranked on unadjusted p value) in cerebral palsy discordant twins

From: Epigenome-wide analysis in newborn blood spots from monozygotic twins discordant for cerebral palsy reveals consistent regional differences in DNA methylation

Probe ID

Rank

Chromosome position

Gene

Location

P value

Methylation difference (%)

cg00376816

1

chr19: 39332571

HNRNPL

 

4.57E-06

11.64

cg25011252

2

chr8: 61777859

CHD7

 

6.33E-06

7.64

cg04242728

3

chr16: 2536153

TBC1D24

 

1.46E-05

− 8.20

cg03907855

4

chr8: 1106363

–

Island

1.52E-05

− 3.20

cg05707458

5

chr1: 205424829

–

Island

1.93E-05

2.39

cg18369327

6

chr5: 109220986

LOC100289673

 

2.07E-05

− 2.54

cg18768238

7

chr10: 49892829

WDFY4

 

2.52E-05

− 8.58

cg14163311

8

chr1: 206730397

RASSF5

 

3.21E-05

8.20

cg16602500

9

chr1: 52889575

ZCCHC11

 

3.64E-05

6.25

cg06419846

10

chr11: 66083572

CD248

 

3.65E-05

5.95

cg03929569

11

chr13: 30688864

–

Island

4.35E-05

0.60

cg14414943

12

chr1: 111770718

CHI3L2

 

4.65E-05

6.21

cg19607845

13

chr6: 52930050

FBXO9

 

4.79E-05

− 9.61

cg19942731

14

chr22: 45609421

C22orf9

 

5.11E-05

− 10.38

cg14073571

15

chr7: 158823178

VIPR2

 

5.14E-05

− 7.59

cg03106245

16

chr11: 47399788

SPI1

 

5.33E-05

− 11.45

cg08936645

17

chr4: 37910273

TBC1D1

 

5.36E-05

− 7.84

cg02806715

18

chr6: 32920567

HLA-DMA

 

5.69E-05

− 6.58

cg17512380

19

chr10: 18971598

–

OpenSea

5.81E-05

5.67

ch.10.89216809R

20

chr10: 89226829

–

OpenSea

6.52E-05

− 3.85

cg15613292

21

chr2: 232478359

–

Shore

6.89E-05

2.62

cg00263248

22

chr14: 98444151

C14orf64

 

6.94E-05

6.40

cg19540797

23

chr2: 3605489

RNASEH1

 

7.30E-05

2.27

cg08360638

24

chr13: 20781097

–

OpenSea

7.52E-05

7.09

cg07728874

25

chr11: 118213272

CD3D

 

7.93E-05

9.14

cg11348257

26

chr1: 76556226

ST6GALNAC3

 

8.03E-05

− 12.35

cg07011093

27

chr3: 123987726

KALRN

 

8.38E-05

− 5.03

cg09335613

28

chr6: 71998106

OGFRL1

 

8.85E-05

− 6.68

cg22230912

29

chr3: 16331335

OXNAD1

 

8.90E-05

11.86

cg13505608

30

chr9: 140128562

SLC34A3

 

9.22E-05

2.53

cg04975778

31

chr2: 62732758

TMEM17

 

9.26E-05

2.31

cg12306086

32

chr4: 106117747

TET2

 

9.52E-05

− 10.22

  1. Methylation difference (%) was calculated as the mean of the DNA methylation levels of the CP twin minus the unaffected twin (Δβ)