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Table 2 NcRNAs altered in OPSCC

From: Novel insights into epigenetic drivers of oropharyngeal squamous cell carcinoma: role of HPV and lifestyle factors

MiRNA Up-/downregulation or polymorphism HPV-associated Environmental factors associated Epigenetic regulation References
Let-7c Down No    [127]
MiR-9 Down No   Promoter methylation [131]
Up Yes    [168, 169, 140]
MiR-18a Down Yes    [168]
Up No    [127]
MiR-20a Up No    [127]
MiR-20b Up Yes    [169, 140]
MiR-21 Up No    [127, 151]
MiR-26b Down Yes    [142]
MiR-30a Up No Alcohol   [150]
MiR-30d Up No    [127]
MiR-31 Down Yes    [168]
MiR-93 Up Yes    [140]
MiR-101 Down Yes    [142]
Up No Alcohol   [150]
MiR-103 Up No    [170]
MiR-106b Up Yes    [140]
MiR-125a Down Yes    [142]
MiR-126 Down Yes    [140, 142]
MiR-127 Down Yes    [142]
MiR-130a Up No    [127]
MiR-137 Down No   Promoter methylation [171]
MiR-143 Down Yes    [140, 142]
MiR-145 Down Yes    [140, 142]
MiR-146 Polymorphism Yes    [129]
MiR-149 Polymorphism Yes    [129]
MiR-155 Up No    [170]
Yes    [168]
MiR-181b/d Up No    [170]
MiR-191 Up No    [170]
MiR-195 Up Yes    [142]
MiR-196 Polymorphism Yes    [129]
MiR-198 Down No    [127]
MiR-199a/b Down Yes    [140, 142]
MiR-200c Up No    [127]
MiR-222 Up Yes    [140]
MiR-223 Down Yes    [168]
MiR-320 Up Yes    [140]
MiR-363 Up Yes    [140, 142]
MiR-372 Up No    [127]
MiR-375 Up   Alcohol   [151]
MiR-379 Down Yes    [142]
MiR-381 Down Yes    [142]
MiR-409 Down Yes    [142]
Up No    [127]
MiR-432 Down Yes    [142]
MiR-433 Down Yes    [142]
MiR-499 Up No    [127]
Polymorphism Yes    [129]
MiR-517 Down Yes    [142]
MiR-675 Up No Alcohol   [150]
MiR-934 Up No Alcohol   [150]
MiR-1201 Down Yes    [142]
MiR-1266 Up No Alcohol   [150]
MiR-3164 Up No Alcohol   [150]
MiR-3178 Up No Alcohol   [150]
MiR-3690 Up No Alcohol   [150]
LncRNA Up-/downregulation HPV-associated Environmental factors associated Epigenetic regulation References
CDKN2B-AS Up Yes    [135]
EGOT Up Yes    [135]
LINC00152 Down Yes    [135]
NCRNA00185 Down Yes    [135]
PRINS Up Yes    [135]
TTTY14 Up Yes    [135]
TTTY15 Up Yes    [135]
XIST Up Yes    [135]