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Table 4 Spearman correlation for blood concentrations of vitamins and metabolites and DNA methylation in specific CpG sites of LINE-1, p16, MLH1, and MGMT genes

From: High levels of circulating folate concentrations are associated with DNA methylation of tumor suppressor and repair genes p16, MLH1, and MGMT in elderly Chileans

 

CpG site

Vit B12 n = 242

Folates n = 241

HoloTC n = 193

Hcy n = 193

MMA n = 193

LINE-1

1

−0.1064

0.0193

−0.1357

0.0509

0.0298

2

−0.0106

−0.1259

−0.0680

−0.0811

0.1004

3

0.1067

0.0360

0.1321

−0.0644

−0.0318

4

−0.0346

−0.0127

−0.1313

0.0281

0.0394

Average

−0.0373

0.0302

−0.1135

0.0604

0.0166

p16

1

0.1888*

0.0156

0.1152

−0.0002

−0.0137

2

−0.0552

−0.1519

0.0104

−0.0239

−0.0303

3

0.2965*

0.2320*

0.1137

−0.1293

−0.1288

5

0.2198*

0.2974*

0.0595

−0.0462

−0.1619

6

−0.1668

−0.1787

−0.0167

0.0709

0.0449

7

0.0863

−0.1029

0.1230

0.0455

−0.0597

Average

0.2288*

0.0867

0.1553

−0.0880

−0.1318

MLH1

1

−0.2809*

−0.1616

0.0360

−0.0555

−0.0634

2

0.0977

0.2453*

−0.0248

−0.0422

−0.0656

3

−0.1404

−0.1102

−0.0374

−0.0393

−0.0451

4

0.1246

0.3121*

0.0399

−0.1387

−0.1486

Average

−0.1081

0.1786*

0.0188

−0.1410

−0.1478

MGMT

1

0.1118

0.2291*

−0.0167

−0.0589

−0.0211

2

0.3142*

0.4196*

−0.0082

−0.0702

−0.1504

3

0.0791

0.2007*

−0.0522

−0.0417

−0.0876

4

−0.1561

−0.3457*

0.0002

0.0808

0.1207

5

−0.1187

−0.1011

−0.0570

−0.0621

−0.0806

6

−0.0111

−0.0272

−0.0012

−0.1773

−0.1511

Average

0.1168

0.2489*

−0.0591

−0.0567

−0.0474

  1. *p < 0.01