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Table 3 List of DMRs identified between total cortex and cerebellum

From: Regional differences in mitochondrial DNA methylation in human post-mortem brain tissue

Start (bp)

Stop (bp)

Gene(s)

p value

1

100

D-Loop

-

101

200

D-Loop

-

201

300

D-Loop

-

301

400

D-Loop

-

401

500

D-Loop

7.99E−03

501

600

MT-TF

4.49E−03

601

700

MT-TF/MT-RNR1

1.16E−02

701

800

MT-RNR1

3.22E−03

801

900

MT-RNR1

1.91E−04

901

1000

MT-RNR1

ND

1001

1100

MT-RNR1

ND

1101

1200

MT-RNR1

ND

1201

1300

MT-RNR1

ND

1301

1400

MT-RNR1

ND

1401

1500

MT-RNR1

ND

1501

1600

MT-RNR1

ND

1601

1700

MT-RNR1/MT-TV/MT-RNR2

ND

1701

1800

MT-RNR2

ND

1801

1900

MT-RNR2

ND

1901

2000

MT-RNR2

ND

2001

2100

MT-RNR2

ND

2101

2200

MT-RNR2

ND

2201

2300

MT-RNR2

ND

2301

2400

MT-RNR2

8.10E−03

2401

2500

MT-RNR2

7.50E−03

2501

2600

MT-RNR2

5.14E−03

2601

2700

MT-RNR2

ND

2701

2800

MT-RNR2

ND

2801

2900

MT-RNR2

-

2901

3000

MT-RNR2

-

3001

3100

MT-RNR2

-

3101

3200

MT-RNR2

-

3201

3300

MT-RNR2/MT-TL

1.51E−03

3301

3400

MT-TL1/MT-ND1

-

3401

3500

MT-ND1

1.37E−02

3501

3600

MT-ND1

4.27E−03

3601

3700

MT-ND1

5.56E−03

3701

3800

MT-ND1

8.21E−03

3801

3900

MT-ND1

-

3901

4000

MT-ND1

-

4001

4100

MT-ND1

3.07E−06

4101

4200

MT-ND1

-

4201

4300

MT-ND1/MT-TI

ND

4301

4400

MT-TI/MT-TQ

ND

4401

4500

MT-TM/MT-ND2

ND

4501

4600

MT-ND2

ND

4601

4700

MT-ND2

ND

4701

4800

MT-ND2

ND

4801

4900

MT-ND2

ND

4901

5000

MT-ND2

ND

5001

5100

MT-ND2

ND

5101

5200

MT-ND2

ND

5201

5300

MT-ND2

ND

5301

5400

MT-ND2

ND

5401

5500

MT-ND2

ND

5501

5600

MT-ND2/MT-TW/MT-TA

ND

5601

5700

MT-TA/MT-TN

ND

5701

5800

MT-TN/MT-TC

ND

5801

5900

MT-TC/MT-TY

ND

5901

6000

MT-CO1

ND

6001

6100

MT-CO1

ND

6101

6200

MT-CO1

ND

6201

6300

MT-CO1

ND

6301

6400

MT-CO1

ND

6401

6500

MT-CO1

ND

6501

6600

MT-CO1

ND

6601

6700

MT-CO1

ND

6701

6800

MT-CO1

ND

6801

6900

MT-CO1

ND

6901

7000

MT-CO1

ND

7001

7100

MT-CO1

ND

7101

7200

MT-CO1

ND

7201

7300

MT-CO1

ND

7301

7400

MT-CO1

ND

7401

7500

MT-CO1/MT-TS1

ND

7501

7600

MT-TS1/MT-TD/MT-CO2

ND

7601

7700

MT-CO2

ND

7701

7800

MT-CO2

ND

7801

7900

MT-CO2

ND

7901

8000

MT-CO2

ND

8001

8100

MT-CO2

ND

8101

8200

MT-CO2

ND

8201

8300

MT-CO2/MT-TK

ND

8301

8400

MT-TK/MT-ATP8

ND

8401

8500

MT-ATP8

ND

8501

8600

MT-ATP8/MT-ATP6

ND

8601

8700

MT-ATP6

ND

8701

8800

MT-ATP6

ND

8801

8900

MT-ATP6

ND

8901

9000

MT-ATP6

ND

9001

9100

MT-ATP6

ND

9101

9200

MT-ATP6

ND

9201

9300

MT-ATP6/MT-CO3

ND

9301

9400

MT-CO3

ND

9401

9500

MT-CO3

ND

9501

9600

MT-CO3

ND

9601

9700

MT-CO3

ND

9701

9800

MT-CO3

ND

9801

9900

MT-CO3

-

9901

10000

MT-CO3/MT-TG

-

10001

10100

MT-TG/MT-ND3

1.81E−02

10101

10200

MT-ND3

1.39E−02

10201

10300

MT-ND3

3.53E−04

10301

10400

MT-ND3/MT-TR/MT-ND4L

1.19E−05

10401

10500

MT-ND4L

2.61E−04

10501

10600

MT-ND4L

9.05E−04

10601

10700

MT-ND4L

ND

10701

10800

MT-ND4L/MT-ND4

ND

10801

10900

MT-ND4

ND

10901

11000

MT-ND4

ND

11001

11100

MT-ND4

ND

11101

11200

MT-ND4

ND

11201

11300

MT-ND4

8.86E−05

11301

11400

MT-ND4

1.65E−03

11401

11500

MT-ND4

ND

11501

11600

MT-ND4

ND

11601

11700

MT-ND4

ND

11701

11800

MT-ND4

ND

11801

11900

MT-ND4

ND

11901

12000

MT-ND4

ND

12001

12100

MT-ND4

ND

12101

12200

MT-ND4/MT-TH

ND

12201

12300

MT-TS2/MT-TL2

ND

12301

12400

MT-TL2/MT-ND5

-

12401

12500

MT-ND5

-

12501

12600

MT-ND5

-

12601

12700

MT-ND5

-

12701

12800

MT-ND5

1.81E−03

12801

12900

MT-ND5

1.05E−02

12901

13000

MT-ND5

8.23E−03

13001

13100

MT-ND5

ND

13101

13200

MT-ND5

ND

13201

13300

MT-ND5

ND

13301

13400

MT-ND5

1.44E−03

13401

13500

MT-ND5

9.13E−04

13501

13600

MT-ND5

1.61E−02

13601

13700

MT-ND5

3.89E−02

13701

13800

MT-ND5

2.77E−04

13801

13900

MT-ND5

2.80E−03

13901

14000

MT-ND5

1.88E−02

14001

14100

MT-ND5

9.31E−03

14101

14200

MT-ND5/MT-ND6

-

14201

14300

MT-ND6

-

14301

14400

MT-ND6

1.04E−02

14401

14500

MT-ND6

1.99E−02

14501

14600

MT-ND6

2.26E−02

14601

14700

MT-ND6/MT-TE

3.82E−03

14701

14800

MT-TE/MT-CYB

1.92E−02

14801

14900

MT-CYB

ND

14901

15000

MT-CYB

ND

15001

15100

MT-CYB

ND

15101

15200

MT-CYB

3.30E−02

15201

15300

MT-CYB

-

15301

15400

MT-CYB

-

15401

15500

MT-CYB

8.52E−04

15501

15600

MT-CYB

7.43E−04

15601

15700

MT-CYB

1.16E−02

15701

15800

MT-CYB

2.24E−02

15801

15900

MT-CYB/MT-TT

-

15901

16000

MT-TT/MT-TP

-

16001

16100

MT-TP

-

16101

16200

D-Loop

2.23E−03

16201

16300

D-Loop

5.02E−04

16301

16400

D-Loop

1.84E−03

16401

16500

D-Loop

1.12E−03

16501

16600

D-Loop

2.20E−03

  1. Shown is the location of the DMR within ChrM (based on GENCODE), the gene(s) residing within the 100 bp window, and p value from a multilevel mixed effects model. Results are displayed in order of genomic position. RPKM and corresponding p values are shown for windows if p < 0.05. Key: - denotes data not significant (p > 0.05); ND denotes not determined as the window was not included in analysis due to removal in NUMT pipeline; bold denotes windows that reached our Bonferroni significant threshold of p < 7.04E−04