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Table 8 CpG pyrosequencing primer sequences

From: DNA methylation profiling in peripheral lung tissues of smokers and patients with COPD

Gene

Forward primer 5′ to 3′

Reverse primer 3′ to 5′

NOS1AP (cg26663636)

TGTTTGGTGAAGTTGGAGTGT

aCCCAATTCCTACCTCTACAAAACATTCA

Sequencing primer: GGTTTGGAGTTTATTAAGTT

TNFAIP2 (cg18620571)

GTTAGAGTAAGGTGGAGG

aCCAAATCCTCCTTCATAATAC

Sequencing primer: AGAGTAAGGTGGAGG

BID (cg01388022)

GAGTTAAATAATGGGTGTTTATGGAT

aTAACCCAACACTAACTATATCACCA

Sequencing primer: ATGGAGAGAGTAGGT

GABRB1 (cg15393297)

aGTTAATGAAAATAGGTAAAGGTTTTGTAAT

AACCACTTATCTATAAAATTCACATC

Sequencing primer: CTATCATAAAAATACATAATAACC

ATXN7/THOC7 (cg07753241)

aTAGGGGTTTTAGGGGAGGTTTAG

CTCCTCCTCCATAACTATTTACC

Sequencing primer: ACTACATTATAAAAATTTAACCT

AHRR (cg21161138)

GGTTGGTGGTGTAGGATATATT

aGACGGGACACCGCTGATCGTTTAACCCATCCTACCCAAATCCTAATAAT

Sequencing primer: GGTTTTAGGTTTAGGGA

SERPINA1 (cg02181506)

TTTTGGTTTAGTTTAGGATTTTGAGG

aAAACACTATACCCAAAACATACACTAC

Sequencing primer: GGATTTTGAGGGTTGTT

  1. aBiotin-labeled: biotinylated primer