From: Immunomethylomic approach to explore the blood neutrophil lymphocyte ratio (NLR) in glioma survival
Chromosome | MAPINFO hg19 location | Strand | Annotated gene | Gene located on the same or opposite transcription strand | SNP 10 bases to hybridization | MAF | Genomic context | Infinium | Enhancer | |
---|---|---|---|---|---|---|---|---|---|---|
cg25938803 | chr2 | 43767347 | + | THADA | Opposite | rs183844032a | 0.0002 | Body | II | |
Sequenceb | ||||||||||
GCACTACAGCCAGTCACCAGCAATGACTGCAAGTAACTCTAGGACACTGACGCCTATTTGATTTGGAAGAGAATAAGGAACATAATGATGCCTGAAATGTC | ||||||||||
cg00901982 | chr2 | 70257298 | − | PCBP1-AS1 | Same | rs533928090 | 0.0002 | Body | II | |
Sequenceb | ||||||||||
GACATTTCAGGCATCATTATGTTCCTTATTCTCTTCCAAATCAAATAGGCGTCAGTGTCCTAGAGTTACTTGCAGTCATTGCTGGTGACTGGCTGTAGTGC | ||||||||||
cg01591037 | chr12 | 15134481 | − | PDE6H | Opposite | rs144778897a | 0.001597 | 3UTR | II | |
Sequenceb | ||||||||||
GACATTTCAGGCATCATTATGTTCCTTATTCTCTTCCAAATCAAATAGGCGTCAGTGTCCTAGAGTTACTTGCAGTCATTGCTGGTGACTGGCTGTAGTGC | ||||||||||
cg10456459 | chr12 | 22843015 | + | ETNK1 | Same | rs373083641 | 0.0002 | 3UTR | II | True |
Sequenceb | ||||||||||
GCACTACAGCCAGTCACCAGCAATGACTGCAAGTAACTCTAGGACACTGACGCCTATTTGATTTGGAAGAGAATAAGGAACATAATGATGCCTGAAATGTC | ||||||||||
cg03621504 | chr12 | 116571240 | + | MED13L | Opposite | N/A | N/A | Body | II | |
Sequenceb | ||||||||||
GCACTACAGCCAGTCACCAGCAATGACTGCAAGTAACTCTAGGACACTGACGCCTATTTGATTTGGAAGAGAATAAGGAACATAATGATGCCTGAAATGTC |